RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 CNGA3Q16281 694 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 ZNF423Q2M1K9 1284 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 BRMS1LQ5PSV4 323 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 KIAA0408Q6ZU52 694 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 TLK2Q86UE8 772 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 ZMIZ2Q8NF64 920 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 NCSTNQ92542 709 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 DPF3Q92784 378 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 DCUN1D1Q96GG9 259 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 CDRT15Q96T59 188 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 EPB41L1Q9H4G0 881 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 PIDD1Q9HB75 910 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 EML4Q9HC35 981 aaKnown RBP12.9□□□□□ -0.34
TCF4-289ENST00000637941 GLOD4Q9HC38 313 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 CSNK1G1Q9HCP0 422 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 UTP6Q9NYH9 597 aaKnown RBP12.9□□□□□ -0.34
TCF4-289ENST00000637941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.9□□□□□ -0.34
TCF4-289ENST00000637941 XPR1Q9UBH6 696 aa12.9□□□□□ -0.34
TCF4-289ENST00000637941 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
TCF4-289ENST00000637941 COL4A4P53420 1690 aaPredicted RBP12.9□□□□□ -0.34
TCF4-289ENST00000637941 TARM1B6A8C7 271 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 DFFAO00273 331 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TREHO43280 583 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 MAP3K13O43283 966 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 AHSGP02765 367 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 PAX3P23760 479 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CD151P48509 253 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 NSUN2Q08J23 767 aaKnown RBP eCLIP12.89□□□□□ -0.35
TCF4-289ENST00000637941 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 FAM110CQ1W6H9 321 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 GPRIN1Q7Z2K8 1008 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 SLC41A1Q8IVJ1 513 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TMEM151AQ8N4L1 468 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 RCN3Q96D15 328 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 PGLYRP2Q96PD5 576 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 HAPLN3Q96S86 360 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 IL12RB2Q99665 862 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 ZDHHC2Q9UIJ5 367 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TCAF1Q9Y4C2 921 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 NUP205Q92621 2012 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 EME2A4GXA9 379 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 I6L893 689 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 MATN3O15232 486 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 DLX3O60479 287 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 BCAS2O75934 225 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 SBK3P0C264 359 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 HSPA1AP0DMV8 641 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 HSPA1BP0DMV9 641 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 ODC1P11926 461 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 GLRBP48167 497 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 DLG1Q12959 904 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 PSMD5Q16401 504 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 KIAA0930Q6ICG6 404 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 KLC3Q6P597 504 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CENPLQ8N0S6 344 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 ZSCAN18Q8TBC5 510 aaPredicted RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 EDEM1Q92611 657 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TOP1MTQ969P6 601 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TSPAN17Q96FV3 270 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CELF6Q96J87 481 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 ELMO2Q96JJ3 720 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 FSD1LQ9BXM9 530 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 MRPL1Q9BYD6 325 aaKnown RBP12.89□□□□□ -0.35
TCF4-289ENST00000637941 TBC1D13Q9NVG8 400 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 PLK2Q9NYY3 685 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 CLIC5Q9NZA1 410 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
TCF4-289ENST00000637941 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
TCF4-289ENST00000637941 C15orf38-AP3S2A0A0A6YYH1 394 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 VAPBO95292 243 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 MYL3P08590 195 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 ENO3P13929 434 aaPredicted RBP12.88□□□□□ -0.35
TCF4-289ENST00000637941 AVPR1AP37288 418 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 THOP1P52888 689 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 STX5Q13190 355 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 FAM83EQ2M2I3 478 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 AGAP9Q5VTM2 703 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 BHLHA9Q7RTU4 235 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 ARPINQ7Z6K5 226 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
TCF4-289ENST00000637941 ACVR1CQ8NER5 493 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 IPMKQ8NFU5 416 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
TCF4-289ENST00000637941 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms