RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CA4P22748 312 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CD70P32970 193 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 KIR2DL1P43626 348 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CSNK1DP48730 415 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 SERPINH1P50454 418 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PAPOLAP51003 745 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 IRAK1P51617 712 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ECT2LQ008S8 904 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 OTUD4Q01804 1114 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 GBE1Q04446 702 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 NSUN2Q08J23 767 aaKnown RBP eCLIP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ZNF211Q13398 564 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 BYSLQ13895 437 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PRKD1Q15139 912 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 GEN1Q17RS7 908 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 P3H1Q32P28 736 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 FSCBQ5H9T9 825 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ARMC3Q5W041 872 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 IL31Q6EBC2 164 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ITPRIPL1Q6GPH6 555 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 TMEM214Q6NUQ4 689 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 SYDE1Q6ZW31 735 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 BMP8AQ7Z5Y6 402 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ADIPOR2Q86V24 386 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 C12orf40Q86WS4 652 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CIR1Q86X95 450 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CREG2Q8IUH2 290 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CCDC13Q8IYE1 715 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 SH2D3CQ8N5H7 860 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 TEX26Q8N6G2 289 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CEP112Q8N8E3 955 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PJA1Q8NG27 643 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ACTL9Q8TC94 416 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 WFDC5Q8TCV5 224 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 LRRC45Q96CN5 670 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 CHFRQ96EP1 664 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 HMCESQ96FZ2 354 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PSKH2Q96QS6 385 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 TUBGCP5Q96RT8 1024 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PSMB7Q99436 277 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 NOL6Q9H6R4 1146 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 LTB4R2Q9NPC1 389 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 RAB6BQ9NRW1 208 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 NDFIP2Q9NV92 336 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 ETNK2Q9NVF9 386 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PLK2Q9NYY3 685 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 THAP10Q9P2Z0 257 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 UBA2Q9UBT2 640 aaPredicted RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 SEPT3Q9UH03 358 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 VPS51Q9UID3 782 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 INTS6Q9UL03 887 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 PLA2G4CQ9UP65 541 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 DRG1Q9Y295 367 aaKnown RBP6.84□□□□□ -1.31
UPF3B-205ENST00000636792 HEY1Q9Y5J3 304 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 SNX10Q9Y5X0 201 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 MRFAP1Q9Y605 127 aa6.84□□□□□ -1.31
UPF3B-205ENST00000636792 A0A0D9SEW6 157 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 EDDM13A0A1B0GTR0 161 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GOLGA6CA6NDK9 693 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GOLGA6BA6NDN3 693 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ERI2A8K979 691 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CBX4O00257 560 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 DFFAO00273 331 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 KRIT1O00522 736 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SCAMP3O14828 347 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 FANCGO15287 622 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 OPHN1O60890 802 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SOCS5O75159 536 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 NEBLO76041 1014 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 PAPSS2O95340 614 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 IGSF6O95976 241 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GAS8O95995 478 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GSRP00390 522 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 FBXO45P0C2W1 286 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GOLGA6DP0CG33 693 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 PECAM1P16284 738 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 NFKBIAP25963 317 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 MSX1P28360 303 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ACTN2P35609 894 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 DNA2P51530 1060 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 GALK1P51570 392 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 EIF3EP60228 445 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 AP1S1P61966 158 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SNRPD1P62314 119 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 DYNLT1P63172 113 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ARF5P84085 180 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 CTBSQ01459 385 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ZBTB16Q05516 673 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 KDSRQ06136 332 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 RAD51Q06609 339 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SFSWAPQ12872 951 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 DHX34Q14147 1143 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ELAVL3Q14576 367 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF235Q14590 738 aa6.83□□□□□ -1.32
UPF3B-205ENST00000636792 SIX1Q15475 284 aaPredicted RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 OASLQ15646 514 aaKnown RBP6.83□□□□□ -1.32
UPF3B-205ENST00000636792 EOGTQ5NDL2 527 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms