RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 AADATQ8N5Z0 425 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TNIP2Q8NFZ5 429 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 N4BP2L2Q92802 583 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TLE6Q9H808 572 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MTMR10Q9NXD2 777 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 AFF4Q9UHB7 1163 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CLDN5O00501 218 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RFPL1O75677 317 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 HSPA1AP0DMV8 641 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 HSPA1BP0DMV9 641 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PFKLP17858 780 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 LAG3P18627 525 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 AOC1P19801 751 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ITGALP20701 1170 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MAPK9P45984 424 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TTPAP49638 278 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PTPN5P54829 565 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 INPP5AQ14642 412 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TSTD2Q5T7W7 516 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF470Q6ECI4 717 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CHST9Q7L1S5 443 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ADGRG6Q86SQ4 1221 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GPR65Q8IYL9 337 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 HJURPQ8NCD3 748 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 STYXQ8WUJ0 223 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 C2orf49Q9BVC5 232 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MUC13Q9H3R2 512 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GJD2Q9UKL4 321 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RGSL1A5PLK6 1076 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ARVCFO00192 962 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 UBDO15205 165 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 AMHP03971 560 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PROCP04070 461 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF7P17097 686 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 YY1P25490 414 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.672e-17■■■■■ 37.8
SCN1A-210ENST00000635776 SERINC3Q13530 473 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 DEFB115Q30KQ5 88 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MSS51Q4VC12 460 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 ANKS6Q68DC2 871 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 FRA10AC1Q70Z53 315 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TMC7Q7Z402 723 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KIF2BQ8N4N8 673 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 THOC1Q96FV9 657 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 THTPAQ9BU02 230 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RNF39Q9H2S5 420 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 MFSD1Q9H3U5 465 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 VWA7Q9Y334 891 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 BACE2Q9Y5Z0 518 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 FKTNO75072 461 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 AVILO75366 819 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PSMG1O95456 288 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 FCGR1AP12314 374 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GFAPP14136 432 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RAP1GDS1P52306 607 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NSUN2Q08J23 767 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NIPAL4Q0D2K0 466 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 LBRQ14739 615 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SH3PXD2AQ5TCZ1 1133 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KLHDC10Q6PID8 442 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 CENPKQ9BS16 269 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NUSAP1Q9BXS6 441 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 WDR6Q9NNW5 1121 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 GSC2O15499 205 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TLR5O60602 858 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TRPA1O75762 1119 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 RHOBTB1O94844 696 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NDST3O95803 873 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJB13P59910 316 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 AP1S1P61966 158 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 SEMA3BQ13214 749 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 DSC3Q14574 896 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 FAM13CQ8NE31 585 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 HEXDCQ8WVB3 486 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 KHSRPQ92945 711 aaKnown RBP eCLIP4.61□□□□□ -1.672e-6■■■□□ 17.2
SCN1A-210ENST00000635776 SDCCAG3Q96C92 435 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 HAUS8Q9BT25 410 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 NT5MQ9NPB1 228 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 TRMT6Q9UJA5 497 aaKnown RBP4.61□□□□□ -1.67
SCN1A-210ENST00000635776 APPL1Q9UKG1 709 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 PCDHB1Q9Y5F3 818 aa4.61□□□□□ -1.67
SCN1A-210ENST00000635776 A0A1B0GVM2 712 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TCAF2A6NFQ2 919 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PITPNM1O00562 1244 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MAP3K6O95382 1288 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MLYCDO95822 493 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ERVK-10P10266 1014 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CREB1P16220 341 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SQLEQ14534 574 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 LPIN1Q14693 890 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TOP1MTQ969P6 601 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PPP2R3CQ969Q6 453 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 NR1H4Q96RI1 486 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 IFRD1O00458 451 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ANGPT2O15123 496 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ACSL4O60488 711 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MPP2Q14168 576 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 POU6F1Q14863 301 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TTC23LQ6PF05 361 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms