RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CASKIN2Q8WXE0 1202 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 FATE1Q969F0 183 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 LRRC45Q96CN5 670 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 MRGPRX3Q96LB0 322 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 AGAP3Q96P47 875 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 NT5MQ9NPB1 228 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 KLHL8Q9P2G9 620 aaPredicted RBP14.67□□□□□ -0.06
LINC00339-208ENST00000634934 SEPT3Q9UH03 358 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 SLC8A2Q9UPR5 921 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 CHD5Q8TDI0 1954 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 KIAA1549LQ6ZVL6 1849 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 WDFY4Q6ZS81 3184 aa14.67□□□□□ -0.06
LINC00339-208ENST00000634934 CXorf51AA0A1B0GTR3 108 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TTC34A8MYJ7 566 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 BNIP3LO60238 219 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ECEL1O95672 775 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ETS1P14921 441 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 STARD6P59095 220 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 RHOAP61586 193 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF234Q14588 700 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 UBXN2BQ14CS0 331 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 DLG2Q15700 870 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TEX44Q53QW1 395 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 CFAP58Q5T655 872 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 PID1Q7Z2X4 250 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 METTL3Q86U44 580 aaKnown RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 CHPFQ8IZ52 775 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TEX26Q8N6G2 289 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TSEN2Q8NCE0 465 aaKnown RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 CCDC110Q8TBZ0 833 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 PBXIP1Q96AQ6 731 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 RUNDC3BQ96NL0 473 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ACOX2Q99424 681 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TNKS2Q9H2K2 1166 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 THAP10Q9P2Z0 257 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 AMACRQ9UHK6 382 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 HCN2Q9UL51 889 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 STARD13Q9Y3M8 1113 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 KANSL1LA0AUZ9 987 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 GAS8O95995 478 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 HLA-DQB2P05538 268 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 HLA-EP13747 358 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 WASP42768 502 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 KIR2DL1P43626 348 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 MRPS25P82663 173 aaKnown RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 DR1Q01658 176 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 E2F5Q15329 346 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TRIP13Q15645 432 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 FBXO43Q4G163 708 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 C22orf39Q6P5X5 142 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 SERPINA13PQ6UXR4 307 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF567Q8N184 647 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ARFGAP2Q8N6H7 521 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF366Q8N895 744 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 FLCNQ8NFG4 579 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 CCDC26Q8TAB7 109 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ZNF419Q96HQ0 510 aaPredicted RBP14.66□□□□□ -0.06
LINC00339-208ENST00000634934 EXOC2Q96KP1 924 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 ZIM3Q96PE6 472 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 VAT1Q99536 393 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TM6SF2Q9BZW4 377 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 FOXQ1Q9C009 403 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TBC1D17Q9HA65 648 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 LTB4R2Q9NPC1 389 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 CACNA2D2Q9NY47 1150 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 PCYOX1Q9UHG3 505 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 TRHDEQ9UKU6 1024 aa14.66□□□□□ -0.06
LINC00339-208ENST00000634934 SHROOM3Q8TF72 1996 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 C5orf60A6NFR6 353 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 FAM170BA6NMN3 283 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 WASH3PC4AMC7 463 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 F5H423 210 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ZBTB24O43167 697 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ATP9BO43861 1147 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 GPR37L1O60883 481 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 GCATO75600 419 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ZSCAN5DPP0CG00 497 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 HNRNPLP14866 589 aaKnown RBP eCLIP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 TARSP26639 723 aaKnown RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 IL12RB1P42701 662 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 CARSP49589 748 aaKnown RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 MAXP61244 160 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 CCINQ13939 588 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 PPP1R7Q15435 360 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 TMEM31Q5JXX7 168 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 DGKKQ5KSL6 1271 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ANKRD20A2Q5SQ80 823 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ATXN7L2Q5T6C5 722 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ANKRD20A1Q5TYW2 823 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ANKRD20A3Q5VUR7 823 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 CWF19L1Q69YN2 538 aaKnown RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 ARHGEF18Q6ZSZ5 1173 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 Q6ZVU0 165 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 MAATS1Q7Z4T9 603 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 YTHDF3Q7Z739 585 aaKnown RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 GSPT2Q8IYD1 628 aaKnown RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 PGBD5Q8N414 524 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 RYBPQ8N488 228 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms