RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SHKBP1Q8TBC3 707 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 ING5Q8WYH8 240 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 MAML1Q92585 1016 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 AGAP3Q96P47 875 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 DDX50Q9BQ39 737 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 CORO1BQ9BR76 489 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 PLA2G2FQ9BZM2 168 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 GBA3Q9H227 469 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 RETREG1Q9H6L5 497 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 EURLQ9NYK6 297 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 SMG5Q9UPR3 1016 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 CPQQ9Y646 472 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 OTOGLQ3ZCN5 2332 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 A0A0D9SEW6 157 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 MATN3O15232 486 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 RAMP2O60895 175 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FGF19O95750 216 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 LATS1O95835 1130 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CKMP06732 381 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ABHD2P08910 425 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 MYL4P12829 197 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PFKLP17858 780 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PSMC3P17980 439 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 NFKB1P19838 968 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CD72P21854 359 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SSTR1P30872 391 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 OR1E1P30953 314 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CNR2P34972 360 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ACVRL1P37023 503 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ELK3P41970 407 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SLC7A9P82251 487 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CDK16Q00536 496 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FZD5Q13467 585 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ANO4Q32M45 955 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 KRT71Q3SY84 523 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 BBS9Q3SYG4 887 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 KCTD16Q68DU8 428 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CROCCP2Q86T23 111 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 MPP5Q8N3R9 675 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FBXO36Q8NEA4 188 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SMARCD2Q92925 531 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FATE1Q969F0 183 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 OXNAD1Q96HP4 312 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SIGLEC10Q96LC7 697 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 TRPV4Q9HBA0 871 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 EIF2B3Q9NR50 452 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 HEBP1Q9NRV9 189 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 IPO11Q9UI26 975 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 TRAV19A0A0A6YYK7 116 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 POLR3GO15318 223 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 TCEA3O75764 348 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 NEBLO76041 1014 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 HLA-DQB2P05538 268 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CEBPBP17676 345 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 NUMBP49757 651 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 YBEYP58557 167 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SERINC3Q13530 473 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SPARCL1Q14515 664 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 LONRF1Q17RB8 773 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PARP15Q460N3 678 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FAM78AQ5JUQ0 283 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 LAIR1Q6GTX8 287 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CXorf57Q6NSI4 855 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ZNF354CQ86Y25 554 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 MFSD6LQ8IWD5 586 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 USP33Q8TEY7 942 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PYROXD1Q8WU10 500 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 FAM3CQ92520 227 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ATP6V1G3Q96LB4 118 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 ASB16Q96NS5 453 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 SMG9Q9H0W8 520 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 LMAN1LQ9HAT1 526 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PDFQ9HBH1 243 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 XAB2Q9HCS7 855 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 PIH1D1Q9NWS0 290 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CTNNAL1Q9UBT7 734 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 RSPH14Q9UHP6 348 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 LSM7Q9UK45 103 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 CCL26Q9Y258 94 aa9.66□□□□□ -0.86
PDLIM5-223ENST00000627587 VPS13AQ96RL7 3174 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 A0A087WUV0 522 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 TSPAN3O60637 253 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CLDN11O75508 207 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 PIAS1O75925 651 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 SUN1O94901 812 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 AP2A1O95782 977 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 SLCO1A2P46721 670 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CDH4P55283 916 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 TNK2Q07912 1038 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 SLC10A7Q0GE19 358 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 MTAPQ13126 283 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 LRRC32Q14392 662 aa9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 POLD3Q15054 466 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-223ENST00000627587 CCDC38Q502W7 563 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms