RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 TMCO5BA8MYB1 307 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 E9PAM4 449 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 RNASEH2AO75792 299 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 CNTN5O94779 1100 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 ENDOD1O94919 500 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SEMA4FO95754 770 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 IL1BP01584 269 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 IGLV3-19P01714 112 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SLC8A1P32418 973 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 RFC1P35251 1148 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 ADRA1BP35368 520 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MAPK8P45983 427 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 PSMD8P48556 350 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 KLHL30Q0D2K2 578 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 NR1I3Q14994 352 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 CST6Q15828 149 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 UAP1L1Q3KQV9 507 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 ZSCAN23Q3MJ62 389 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 C5orf22Q49AR2 442 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 TDRD12Q587J7 1177 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 PPM1JQ5JR12 505 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 C9orf64Q5T6V5 341 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 OTUD1Q5VV17 481 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 FAM46CQ5VWP2 391 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 CXorf57Q6NSI4 855 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 RWDD4Q6NW29 188 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 WDR59Q6PJI9 974 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 USP30Q70CQ3 517 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MON1BQ7L1V2 547 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 STRADAQ7RTN6 431 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 IRF2BP2Q7Z5L9 587 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 TFAP2DQ7Z6R9 452 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SLFN11Q7Z7L1 901 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SETD3Q86TU7 594 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 VPS36Q86VN1 386 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MMAAQ8IVH4 418 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 SLC41A1Q8IVJ1 513 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MCOLN2Q8IZK6 566 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 STK40Q8N2I9 435 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 HDDC3Q8N4P3 179 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 ATP11CQ8NB49 1132 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 JOSD2Q8TAC2 188 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 FAM172AQ8WUF8 416 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 CPLX3Q8WVH0 158 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 OR8D1Q8WZ84 308 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 IQCDQ96DY2 449 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 VCPIP1Q96JH7 1222 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MRGPRX3Q96LB0 322 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MCEEQ96PE7 176 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 FUCA2Q9BTY2 467 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SPON2Q9BUD6 331 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.55□□□□□ -1.36
TCF4-249ENST00000625716 GTPBP2Q9BX10 602 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 PCED1AQ9H1Q7 454 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 PABPC3Q9H361 631 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 MTG2Q9H4K7 406 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 HAUS4Q9H6D7 363 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 CD93Q9NPY3 652 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 TMEM74BQ9NUR3 256 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 PARVAQ9NVD7 372 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 FBXL12Q9NXK8 326 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 MPP6Q9NZW5 540 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 PPARGC1AQ9UBK2 798 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 OR12D3Q9UGF7 316 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D30Q9Y2I9 924 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 SNX10Q9Y5X0 201 aa6.55□□□□□ -1.36
TCF4-249ENST00000625716 BZW2Q9Y6E2 419 aaKnown RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 PTPRZ1P23471 2315 aaPredicted RBP6.55□□□□□ -1.36
TCF4-249ENST00000625716 A0A1B0GTW7 788 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 A0A1W2PQJ5 194 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ILVBLA1L0T0 632 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 CBX4O00257 560 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 MID1O15344 667 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 BCAT2O15382 392 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 CBFA2T2O43439 604 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 OPHN1O60890 802 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 RTN2O75298 545 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 FSBPO95073 299 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 GJB6O95452 261 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 TGFB1P01137 390 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 FTLP02792 175 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 PLEKP08567 350 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 GZMAP12544 262 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 GOT1P17174 413 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ENGP17813 658 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 C5AR1P21730 350 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 MAOBP27338 520 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ACSL1P33121 698 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ETFBP38117 255 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 STK19P49842 368 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 IRAK1P51617 712 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ZNF143P52747 638 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 GSCP56915 257 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 SLC20A2Q08357 652 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms