RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 PAAF1Q9BRP4 392 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 ZBTB26Q9HCK0 441 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 MIOSQ9NXC5 875 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 TBC1D30Q9Y2I9 924 aa11.41□□□□□ -0.58
VARS2-213ENST00000625423 SHROOM3Q8TF72 1996 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 DNAH12Q6ZR08 3092 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SLCO1B7G3V0H7 640 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 PSMD3O43242 534 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 CACNG3O60359 315 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 PIM1P11309 404 aaPredicted RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 CHN2P52757 468 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 HK2P52789 917 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 COG7P83436 770 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ART3Q13508 389 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 TLR1Q15399 786 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 C11orf91Q3C1V1 193 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 DENND5AQ6IQ26 1287 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 UGT2A3Q6UWM9 527 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ISLR2Q6UXK2 745 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 TMEM86AQ8N2M4 240 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 KDM1BQ8NB78 822 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ELMO2Q96JJ3 720 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 TSGA13Q96PP4 275 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SUDS3Q9H7L9 328 aaPredicted RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 WDR41Q9HAD4 459 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 RRAGCQ9HB90 399 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 COPG1Q9Y678 874 aaKnown RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 PTCH2Q9Y6C5 1203 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 GLTPD2A6NH11 291 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 CASTOR2A6NHX0 329 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SNUPNO95149 360 aaKnown RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 COL6A2P12110 1019 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 BDNFP23560 247 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 DNAJB2P25686 324 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SLC1A2P43004 574 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ARCN1P48444 511 aaKnown RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 CNGA3Q16281 694 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 UGP2Q16851 508 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SH2D4BQ5SQS7 431 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ZNF280DQ6N043 979 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 SETD3Q86TU7 594 aaPredicted RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 CNTN4Q8IWV2 1026 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ARHGAP12Q8IWW6 846 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 PGAM4Q8N0Y7 254 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 ATPAF2Q8N5M1 289 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 BHLHE22Q8NFJ8 381 aaPredicted RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 DQX1Q8TE96 717 aaKnown RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 MYLPFQ96A32 169 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 LRGUKQ96M69 825 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 NPAS2Q99743 824 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 COPS7BQ9H9Q2 264 aaPredicted RBP11.4□□□□□ -0.58
VARS2-213ENST00000625423 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 FIS1Q9Y3D6 152 aa11.4□□□□□ -0.58
VARS2-213ENST00000625423 C15orf38-AP3S2A0A0A6YYH1 394 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 C17orf102A2RUQ5 167 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 HAS3O00219 553 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 THP07101 528 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 ETS2P15036 469 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 TCN1P20061 433 aaPredicted RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 CCNCP24863 283 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 TAS2R39P59534 338 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 EML3Q32P44 896 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 ARPINQ7Z6K5 226 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 PPHLN1Q8NEY8 458 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 TMA16Q96EY4 203 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 GLOD4Q9HC38 313 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 NEU3Q9UQ49 428 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 NEMP2A6NFY4 417 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 SLC22A2O15244 555 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 PMPCBO75439 489 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 HNRNPLP14866 589 aaKnown RBP eCLIP11.39□□□□□ -0.59
VARS2-213ENST00000625423 PAN2Q504Q3 1202 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 LCA5Q86VQ0 697 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 TXNDC5Q8NBS9 432 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 FAM156AQ8NDB6 213 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 HEXDCQ8WVB3 486 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 FCRL5Q96RD9 977 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 MRPL46Q9H2W6 279 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 EFCAB1Q9HAE3 211 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 NDFIP2Q9NV92 336 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 SLC38A7Q9NVC3 462 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 CENPFP49454 3210 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 MAFKO60675 156 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 ANXA9O76027 345 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 ME2P23368 584 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 CHRNA4P43681 627 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 SEPT6Q14141 434 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 ADGRE1Q14246 886 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 RBBP5Q15291 538 aaKnown RBP11.39□□□□□ -0.59
VARS2-213ENST00000625423 SATL1Q86VE3 508 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 KLHDC8BQ8IXV7 354 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 LILRA2Q8N149 483 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms