RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SETD3Q86TU7 594 aaPredicted RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 PHACTR4Q8IZ21 702 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 RYBPQ8N488 228 aaPredicted RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 FBXO39Q8N4B4 442 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 BTN2A2Q8WVV5 523 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 KLF6Q99612 283 aaPredicted RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 HEPHQ9BQS7 1158 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 LRRC61Q9BV99 259 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 BOCQ9BWV1 1114 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 WDCPQ9H6R7 721 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 SYNCQ9H7C4 482 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 ANLNQ9NQW6 1124 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 PIGVQ9NUD9 493 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 GULP1Q9UBP9 304 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 GGT7Q9UJ14 662 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 PADI4Q9UM07 663 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 ITM2BQ9Y287 266 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 ZDHHC9Q9Y397 364 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 COL12A1Q99715 3063 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 AGRPO00253 132 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 PLD2O14939 933 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 ZNF821O75541 412 aaPredicted RBP14.95□□□□□ -0.02
PNKP-218ENST00000625299 HGFP14210 728 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 SLC5A2P31639 672 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 FAXCQ5TGI0 409 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 ESRP1Q6NXG1 681 aaKnown RBP14.95□□□□□ -0.02
PNKP-218ENST00000625299 GJB7Q6PEY0 223 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 OLFML1Q6UWY5 402 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 LRRC31Q6UY01 552 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 C11orf57Q6ZUT1 292 aaPredicted RBP14.95□□□□□ -0.02
PNKP-218ENST00000625299 C1orf131Q8NDD1 294 aaKnown RBP14.95□□□□□ -0.02
PNKP-218ENST00000625299 OR6K2Q8NGY2 324 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 SGF29Q96ES7 293 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 FOXP3Q9BZS1 431 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 SLC13A1Q9BZW2 595 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 TM6SF2Q9BZW4 377 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 ATP13A1Q9HD20 1204 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 SIRPGQ9P1W8 387 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 DOLKQ9UPQ8 538 aa14.95□□□□□ -0.02
PNKP-218ENST00000625299 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
PNKP-218ENST00000625299 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 AP1G1O43747 822 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 AFPP02771 609 aaKnown RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 ERBB2P04626 1255 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 CELA2BP08218 269 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 FAM87AP0C7U9 286 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 TFE3P19532 575 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 GKP32189 559 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 NOS2P35228 1153 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 UGT1A5P35504 534 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 ABL2P42684 1182 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 SULT1E1P49888 294 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 SERPINH1P50454 418 aaKnown RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 RNASE9P60153 205 aaKnown RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 PFN3P60673 137 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 PTK2BQ14289 1009 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 ARHGAP44Q17R89 818 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 CARD16Q5EG05 197 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 OTUD1Q5VV17 481 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 RETSATQ6NUM9 610 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 RAB11FIP2Q7L804 512 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 WDTC1Q8N5D0 677 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 PCDH20Q8N6Y1 951 aaKnown RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 LIN37Q96GY3 246 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 DHTKD1Q96HY7 919 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 LENG8Q96PV6 779 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 C1QTNF2Q9BXJ5 285 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 CEP44Q9C0F1 390 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 TMPRSS4Q9NRS4 437 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 ARHGEF38Q9NXL2 777 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 PNMA8BQ9ULN7 279 aaPredicted RBP14.94□□□□□ -0.02
PNKP-218ENST00000625299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
PNKP-218ENST00000625299 ACTL7AQ9Y615 435 aa14.94□□□□□ -0.02
PNKP-218ENST00000625299 BSNQ9UPA5 3926 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 LMO7DNF2Z398 122 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 I6L893 689 aaPredicted RBP14.93□□□□□ -0.02
PNKP-218ENST00000625299 TERTO14746 1132 aaKnown RBP14.93□□□□□ -0.02
PNKP-218ENST00000625299 YY2O15391 372 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 TSPAN6O43657 245 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 SRGAP2O75044 1071 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 TSHRP16473 764 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 LRRC73Q5JTD7 316 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 BRMS1LQ5PSV4 323 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 ZSCAN30Q86W11 494 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 TRIM59Q8IWR1 403 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 ZNF683Q8IZ20 524 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 FMR1NBQ8N0W7 255 aaPredicted RBP14.93□□□□□ -0.02
PNKP-218ENST00000625299 SDR16C5Q8N3Y7 309 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 DENND6BQ8NEG7 585 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 NELFBQ8WX92 580 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 CCDC74AQ96AQ1 378 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 GFM1Q96RP9 751 aaKnown RBP14.93□□□□□ -0.02
PNKP-218ENST00000625299 STRADBQ9C0K7 418 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 CLPBQ9H078 707 aa14.93□□□□□ -0.02
PNKP-218ENST00000625299 HECAQ9UBI9 543 aaPredicted RBP14.93□□□□□ -0.02
PNKP-218ENST00000625299 PISDQ9UG56 409 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms