RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	VPS28	Q9UK41	221 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	PADI4	Q9UM07	663 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	HS3ST2	Q9Y278	367 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	ITM2B	Q9Y287	266 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	FADS3	Q9Y5Q0	445 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	WASF2	Q9Y6W5	498 aa		11.93	□□□□□ -0.5
SNHG5-213	ENST00000622963	ANKRD17	O75179	2603 aa	Known RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	KCNU1	A8MYU2	1149 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963		H3BM21	787 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	YY2	O15391	372 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	ZNF821	O75541	412 aa	Predicted RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	CNTN5	O94779	1100 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	FBXO21	O94952	628 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TRUB2	O95900	331 aa	Known RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	ABL2	P42684	1182 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	RABIF	P47224	123 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	RPL34	P49207	117 aa	Known RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	ADAM9	Q13443	819 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TAF5	Q15542	800 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	CNGA2	Q16280	664 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	PRRT3	Q5FWE3	981 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	MANEA	Q5SRI9	462 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TMEM270	Q6UE05	265 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	LINGO4	Q6UY18	593 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TMPRSS9	Q7Z410	1059 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	DCP2	Q8IU60	420 aa	Known RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	PHACTR4	Q8IZ21	702 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TMIE	Q8NEW7	156 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	NAT6	Q93015	286 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	VOPP1	Q96AW1	172 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	HSFY1	Q96LI6	401 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	HDAC8	Q9BY41	377 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	NCKIPSD	Q9NZQ3	722 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	APOBEC3B	Q9UH17	382 aa	Known RBP	11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	VPS51	Q9UID3	782 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	COQ4	Q9Y3A0	265 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	LOXL2	Q9Y4K0	774 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	PAXBP1	Q9Y5B6	917 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	TRPM6	Q9BX84	2022 aa		11.92	□□□□□ -0.5
SNHG5-213	ENST00000622963	CREBBP	Q92793	2442 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	IGLON5	A6NGN9	336 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	C9orf172	C9J069	976 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	LMO7DN	F2Z398	122 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	NVL	O15381	856 aa	Known RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	LEFTY1	O75610	366 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	ENDOD1	O94919	500 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	RPLP0	P05388	317 aa	Known RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SFTPC	P11686	197 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	ADRB3	P13945	408 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	TSHR	P16473	764 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	IGFALS	P35858	605 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	INHBC	P55103	352 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	ARTN	Q5T4W7	220 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	KCTD16	Q68DU8	428 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	C22orf39	Q6P5X5	142 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	DPY19L3	Q6ZPD9	716 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	PARS2	Q7L3T8	475 aa	Known RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SFTPA2	Q8IWL1	248 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	CEP57L1	Q8IYX8	460 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	JPH3	Q8WXH2	748 aa	Predicted RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	RPRD1A	Q96P16	312 aa	Predicted RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	C1QTNF2	Q9BXJ5	285 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SLC12A9	Q9BXP2	914 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	CPEB1	Q9BZB8	566 aa	Known RBP	11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	ANLN	Q9NQW6	1124 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	KCNK4	Q9NYG8	393 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SIRPG	Q9P1W8	387 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SEPT3	Q9UH03	358 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	VANGL2	Q9ULK5	521 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	PLAA	Q9Y263	795 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SNX10	Q9Y5X0	201 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	ACTL7A	Q9Y615	435 aa		11.91	□□□□□ -0.5
SNHG5-213	ENST00000622963	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963		I6L893	689 aa	Predicted RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	SIAH2	O43255	324 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	RHOBTB3	O94955	611 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	PAEP	P09466	180 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	CCKBR	P32239	447 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	GPD2	P43304	727 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	ARSD	P51689	593 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	NEK3	P51956	506 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	RPS21	P63220	83 aa	Known RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	NUCB2	P80303	420 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	EIF3I	Q13347	325 aa	Known RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	AUH	Q13825	339 aa	Known RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	MORC3	Q14149	939 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	ALF	Q53S48	1182 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	KIAA1161	Q6NSJ0	714 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	DENND1B	Q6P3S1	775 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	FAM26E	Q8N5C1	309 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	ATP6V0D2	Q8N8Y2	350 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	ATP11C	Q8NB49	1132 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	ZSCAN1	Q8NBB4	408 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	PCDH19	Q8TAB3	1148 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	WDR48	Q8TAF3	677 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	FAM174A	Q8TBP5	190 aa		11.9	□□□□□ -0.5
SNHG5-213	ENST00000622963	USP7	Q93009	1102 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms