RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SMIM28A0A1B0GU29 152 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 FOXN2P32314 431 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 HOXD13P35453 343 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 ALDH9A1P49189 494 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 MRPS6P82932 125 aaKnown RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 TMEM26Q6ZUK4 368 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 ZBTB46Q86UZ6 589 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 FAM228AQ86W67 206 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 DGCR6LQ9BY27 220 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 PADI4Q9UM07 663 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 ATXN2Q99700 1313 aaKnown RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 STAG3L4Q8TBR4 150 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 NIFKQ9BYG3 293 aaKnown RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 DENND2DQ9H6A0 471 aaPredicted RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 HGFP14210 728 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 ZFRQ96KR1 1074 aaKnown RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 TSC22D4Q9Y3Q8 395 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 MTA2O94776 668 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 CRHR1P34998 444 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 CACUL1Q86Y37 369 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 MRPL57Q9BQC6 102 aaKnown RBP16.31■□□□□ 0.2
GABRB3-215ENST00000622697 TMEM109Q9BVC6 243 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 SNX10Q9Y5X0 201 aa16.31■□□□□ 0.2
GABRB3-215ENST00000622697 DEFA1P59665 94 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DEFA3P59666 94 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DET1Q7L5Y6 550 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 AZIN2Q96A70 460 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 TMPRSS4Q9NRS4 437 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 FAM20BO75063 409 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 SEMA5AQ13591 1074 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 EID3Q8N140 333 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 C9orf16Q9BUW7 83 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ZYG11BQ9C0D3 744 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 VPS45Q9NRW7 570 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 PCDHGC3Q9UN70 934 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 INVSQ9Y283 1065 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DYRK1BQ9Y463 629 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 HOXA2O43364 376 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 BCL10O95999 233 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ADRA1BP35368 520 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 FOLH1Q04609 750 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 BCL2L1Q07817 233 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 PTPRNQ16849 979 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 HMGXB4Q9UGU5 601 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CLUHO75153 1309 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 OR4Q2P0C623 313 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CNTN1Q12860 1018 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 MAPK11Q15759 364 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 RP9Q8TA86 221 aaKnown RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 OSGEPL1Q9H4B0 414 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ARL15Q9NXU5 204 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 UGT1A9O60656 530 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 GSTM1P09488 218 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 MSH3P20585 1137 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 HADHBP55084 474 aaKnown RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 WNT3AP56704 352 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 SQLEQ14534 574 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 VSTM1Q6UX27 236 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 GK5Q6ZS86 529 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 TRMT11Q7Z4G4 463 aaKnown RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 LDB1Q86U70 411 aaPredicted RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 EMILIN2Q9BXX0 1053 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ABCG8Q9H221 673 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 UGT1A7Q9HAW7 530 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 UGT1A10Q9HAW8 530 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 UGT1A8Q9HAW9 530 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
GABRB3-215ENST00000622697 CHKBQ9Y259 395 aa16.3■□□□□ 0.2
GABRB3-215ENST00000622697 ATG7O95352 703 aa16.29■□□□□ 0.2
GABRB3-215ENST00000622697 NDUFV1P49821 464 aa16.29■□□□□ 0.2
GABRB3-215ENST00000622697 CLCN5P51795 746 aa16.29■□□□□ 0.2
GABRB3-215ENST00000622697 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
GABRB3-215ENST00000622697 LBX2Q6XYB7 198 aa16.29■□□□□ 0.2
GABRB3-215ENST00000622697 CLEC4CQ8WTT0 213 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms