RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CD86P42081 329 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 RGRP47804 291 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 GEMP55040 296 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 EIF4HQ15056 248 aaKnown RBP18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 TPSAB1Q15661 275 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 ARRDC2Q8TBH0 407 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 FMO2Q99518 471 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 TM6SF2Q9BZW4 377 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 EIF2B3Q9NR50 452 aaKnown RBP18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 MTRF1LQ9UGC7 380 aaKnown RBP18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 SLCO3A1Q9UIG8 710 aa18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 AAR2Q9Y312 384 aaKnown RBP18.07■□□□□ 0.48
PTCHD3-202ENST00000622555 SPECC1L-ADORA2AF8WAN1 911 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 TIMM44O43615 452 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 NARSO43776 548 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 GJB3O75712 270 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 MT-CYBP00156 380 aaPredicted RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 CTHP32929 405 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 NNMTP40261 264 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 GRIA2P42262 883 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 SCNN1BP51168 640 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 CBX1P83916 185 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 TDGQ13569 410 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 ACCSLQ4AC99 568 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 ALG1LQ6GMV1 187 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 C22orf39Q6P5X5 142 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 SFTPA1Q8IWL2 248 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 ADHFE1Q8IWW8 467 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 P2RY13Q9BPV8 354 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 SCUBE2Q9NQ36 999 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 HEBP1Q9NRV9 189 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PIAS3Q9Y6X2 628 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 F5P12259 2224 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 ERI2A8K979 691 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PSMD3O43242 534 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PMPCBO75439 489 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 AP2A1O95782 977 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 SRPRAP08240 638 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 GALK1P51570 392 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PFKPQ01813 784 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 SPARCL1Q14515 664 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 DLG2Q15700 870 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 NUDT18Q6ZVK8 323 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PRPF39Q86UA1 669 aaKnown RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 UCMAQ8WVF2 138 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 MRGPRX3Q96LB0 322 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 TNKS2Q9H2K2 1166 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 C8orf33Q9H7E9 229 aaPredicted RBP18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 LRRC40Q9H9A6 602 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 FAM153AQ9UHL3 310 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 PLA2G4CQ9UP65 541 aa18.06■□□□□ 0.48
PTCHD3-202ENST00000622555 MMP2P08253 660 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 CR2P20023 1033 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 CES1P23141 567 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 ST8SIA6P61647 398 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 CDK16Q00536 496 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 NSUN2Q08J23 767 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 MPP3Q13368 585 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 PTPRNQ16849 979 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 DGKKQ5KSL6 1271 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 KCTD11Q693B1 232 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 RALGPS2Q86X27 583 aaPredicted RBP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 SUGP1Q8IWZ8 645 aaKnown RBP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 ZCCHC9Q8N567 271 aaKnown RBP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 IPMKQ8NFU5 416 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 ISG20Q96AZ6 181 aaKnown RBP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 PWWP2AQ96N64 755 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 NUDCD1Q96RS6 583 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 CEP44Q9C0F1 390 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 NOD2Q9HC29 1040 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 FBRSL1Q9HCM7 1045 aaKnown RBP18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 PRKAG3Q9UGI9 489 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 SLC8A2Q9UPR5 921 aa18.05■□□□□ 0.48
PTCHD3-202ENST00000622555 INSIG1O15503 277 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 ATP9BO43861 1147 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 IGSF6O95976 241 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 SERPINF2P08697 491 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 FAM153BP0C7A2 387 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 SRFP11831 508 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 SARNPP82979 210 aaKnown RBP18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 SKOR1P84550 965 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 ZP2Q05996 745 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 PCSK7Q16549 785 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 FAM153CQ494X1 144 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 MAP9Q49MG5 647 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 FNDC3BQ53EP0 1204 aaKnown RBP18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 TXNDC11Q6PKC3 985 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 PPP1R21Q6ZMI0 780 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 CCDC25Q86WR0 208 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 KLHDC8BQ8IXV7 354 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 PCDH20Q8N6Y1 951 aaKnown RBP18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 MCUQ8NE86 351 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 GDAP1L1Q96MZ0 367 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 FSD1LQ9BXM9 530 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 VPS45Q9NRW7 570 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 UNC80Q8N2C7 3258 aa18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 MUC22E2RYF6 1773 aaPredicted RBP18.04■□□□□ 0.48
PTCHD3-202ENST00000622555 TTC34A8MYJ7 566 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms