RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 STARD13Q9Y3M8 1113 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 C2orf16Q68DN1 1984 aa8.15□□□□□ -1.11
CPNE3-209ENST00000620393 OBSL1O75147 1896 aa8.15□□□□□ -1.11
CPNE3-209ENST00000620393 ERI2A8K979 691 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SPECC1L-ADORA2AF8WAN1 911 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 NARSO43776 548 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ATP9BO43861 1147 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF821O75541 412 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ANXA9O76027 345 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 KAT7O95251 611 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SRFP11831 508 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SRCP12931 536 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 TPSB2P20231 275 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 PSMB4P28070 264 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 TNFRSF8P28908 595 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CTHP32929 405 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 NNMTP40261 264 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SOX9P48436 509 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CSNK1DP48730 415 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 PRSS12P56730 875 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 MAXP61244 160 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 VSNL1P62760 191 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 BASP1P80723 227 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CDK16Q00536 496 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ZP2Q05996 745 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 KCNJ11Q14654 390 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 E2F5Q15329 346 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 TPSAB1Q15661 275 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 DLG2Q15700 870 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 PTPRNQ16849 979 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SLC44A4Q53GD3 710 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 RALGPS1Q5JS13 557 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 FAXCQ5TGI0 409 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 IZUMO3Q5VZ72 239 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 NAIF1Q69YI7 327 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ALG1LQ6GMV1 187 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ZDHHC24Q6UX98 284 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 PRPF39Q86UA1 669 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 HOOK3Q86VS8 718 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 PPIL6Q8IXY8 311 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 TAB3Q8N5C8 712 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SH2D3CQ8N5H7 860 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 MCUQ8NE86 351 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CYB5D2Q8WUJ1 264 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 UCMAQ8WVF2 138 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ATXN2LQ8WWM7 1075 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SORCS1Q8WY21 1168 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 EXOC4Q96A65 974 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 TADA1Q96BN2 335 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 IMP4Q96G21 291 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 OXNAD1Q96HP4 312 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 RPL10LQ96L21 214 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 NUDCD1Q96RS6 583 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 SEMA3CQ99985 751 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 P2RY13Q9BPV8 354 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 GORASP1Q9BQQ3 440 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CIPCQ9C0C6 399 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 CEP44Q9C0F1 390 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 POLR1EQ9GZS1 481 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 VPS45Q9NRW7 570 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 ZDHHC18Q9NUE0 388 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 LHX3Q9UBR4 397 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 FAM153AQ9UHL3 310 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 NFU1Q9UMS0 254 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 FCF1Q9Y324 198 aaKnown RBP8.14□□□□□ -1.11
CPNE3-209ENST00000620393 REV3LO60673 3130 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 DOCK8Q8NF50 2099 aa8.14□□□□□ -1.11
CPNE3-209ENST00000620393 UQCRHLA0A096LP55 91 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 TCRBV7S3A2A0A539 114 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 TTC24A2A3L6 582 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 GOLGA6CA6NDK9 693 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 GOLGA6BA6NDN3 693 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 E7EVH7 732 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 F5H423 210 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 INSIG1O15503 277 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SUN1O94901 812 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 AP2A1O95782 977 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MT-CYBP00156 380 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 EPOP01588 193 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 APRTP07741 180 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 UQCRHP07919 91 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 MMP2P08253 660 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 GOLGA6DP0CG33 693 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 BMP1P13497 986 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 ECHS1P30084 290 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 RGRP47804 291 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 LMAN1P49257 510 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 STK19P49842 368 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SCNN1BP51168 640 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 GEMP55040 296 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 RHOAP61586 193 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 ST8SIA6P61647 398 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SNRPD1P62314 119 aaKnown RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SARNPP82979 210 aaKnown RBP8.13□□□□□ -1.11
CPNE3-209ENST00000620393 SKOR1P84550 965 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 DSC2Q02487 901 aa8.13□□□□□ -1.11
CPNE3-209ENST00000620393 KDSRQ06136 332 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms