RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 DLG1Q12959 904 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 EP400NLQ6ZTU2 488 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 LRRTM3Q86VH5 581 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 CENPLQ8N0S6 344 aaPredicted RBP30.45■■■□□ 2.46
KHSRP-213ENST00000619396 RP9Q8TA86 221 aaKnown RBP30.45■■■□□ 2.46
KHSRP-213ENST00000619396 KCTD4Q8WVF5 259 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 ADAM2Q99965 735 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 PTCH2Q9Y6C5 1203 aa30.45■■■□□ 2.46
KHSRP-213ENST00000619396 SLC22A2O15244 555 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 DDHD2O94830 711 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 RPL9P32969 192 aaKnown RBP30.44■■■□□ 2.46
KHSRP-213ENST00000619396 NUDT2P50583 147 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 NAGLUP54802 743 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 RPL26P61254 145 aaKnown RBP30.44■■■□□ 2.46
KHSRP-213ENST00000619396 NSUN2Q08J23 767 aaKnown RBP eCLIP30.44■■■□□ 2.46
KHSRP-213ENST00000619396 PRKAA1Q13131 559 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 LPIN1Q14693 890 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 OGFRL1Q5TC84 451 aaPredicted RBP30.44■■■□□ 2.46
KHSRP-213ENST00000619396 LINC00523Q86TU6 105 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 KYQ8NBH2 561 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 OR10T2Q8NGX3 314 aa30.44■■■□□ 2.46
KHSRP-213ENST00000619396 TRMT13Q9NUP7 481 aaKnown RBP30.44■■■□□ 2.46
KHSRP-213ENST00000619396 CCDC78A2IDD5 438 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PSMD3O43242 534 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 CHRM1P11229 460 aaPredicted RBP30.43■■■□□ 2.46
KHSRP-213ENST00000619396 SAT1P21673 171 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 SLC12A1Q13621 1099 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 GRM2Q14416 872 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 DCLRE1AQ6PJP8 1040 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 C16orf89Q6UX73 402 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 TMC7Q7Z402 723 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 MFN1Q8IWA4 741 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 DSELQ8IZU8 1212 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PPP1R36Q96LQ0 422 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 SH3GL3Q99963 347 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 VPS28Q9UK41 221 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PACSIN3Q9UKS6 424 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 DNAJB1P25685 340 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PCSK1P29120 753 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 GLRBP48167 497 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 FCGRTP55899 365 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PKN3Q6P5Z2 889 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 FSTL5Q8N475 847 aaPredicted RBP30.43■■■□□ 2.46
KHSRP-213ENST00000619396 NUF2Q9BZD4 464 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 PSMD13Q9UNM6 376 aa30.43■■■□□ 2.46
KHSRP-213ENST00000619396 ODC1P11926 461 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 COL6A2P12110 1019 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 AVPR1AP37288 418 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 PCID2Q5JVF3 399 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 CNTN4Q8IWV2 1026 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 SCAMP5Q8TAC9 235 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 GPR78Q96P69 363 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 CSNK1G1Q9HCP0 422 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 VTI1BQ9UEU0 232 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 MRPL42Q9Y6G3 142 aaKnown RBP30.42■■■□□ 2.46
KHSRP-213ENST00000619396 DLX3O60479 287 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 ELNP15502 786 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 ADSLP30566 484 aaPredicted RBP30.42■■■□□ 2.46
KHSRP-213ENST00000619396 ZNF33AQ06730 810 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 MAP3K21Q5TCX8 1036 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 SLC41A1Q8IVJ1 513 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 SPATA22Q8NHS9 363 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 SCYL1Q96KG9 808 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 TSNARE1Q96NA8 513 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 BTBD9Q96Q07 612 aa30.42■■■□□ 2.46
KHSRP-213ENST00000619396 TTC3P53804 2025 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 PPARGP37231 505 aaPredicted RBP30.41■■■□□ 2.46
KHSRP-213ENST00000619396 POLE2P56282 527 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 CYLC2Q14093 348 aaPredicted RBP30.41■■■□□ 2.46
KHSRP-213ENST00000619396 DSC3Q14574 896 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 PPP2R5DQ14738 602 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 ZNF423Q2M1K9 1284 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 TAC4Q86UU9 113 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 MFSD6LQ8IWD5 586 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 USP33Q8TEY7 942 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 SERPINI1Q99574 410 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 G3BP2Q9UN86 482 aaKnown RBP30.41■■■□□ 2.46
KHSRP-213ENST00000619396 SLCO1B7G3V0H7 640 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 CA12O43570 354 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 C11orf91Q3C1V1 193 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 LIN52Q52LA3 116 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 PIGGQ5H8A4 983 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 LRRC8EQ6NSJ5 796 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 FAM171BQ6P995 826 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 ARHGAP36Q6ZRI8 547 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 PQLC1Q8N2U9 271 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 ARHGAP18Q8N392 663 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 C6orf203Q9P0P8 240 aaPredicted RBP30.41■■■□□ 2.46
KHSRP-213ENST00000619396 NEU3Q9UQ49 428 aa30.41■■■□□ 2.46
KHSRP-213ENST00000619396 A0A0U1RQF3 1178 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 ZNF623O75123 536 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 JUNP05412 331 aaKnown RBP30.4■■■□□ 2.46
KHSRP-213ENST00000619396 ALDH1A3P47895 512 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 MMEL1Q495T6 779 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 DENND5AQ6IQ26 1287 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 ST13P4Q8IZP2 240 aaPredicted RBP30.4■■■□□ 2.46
KHSRP-213ENST00000619396 CDRT15Q96T59 188 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 ACOT9Q9Y305 439 aa30.4■■■□□ 2.46
KHSRP-213ENST00000619396 ARCN1P48444 511 aaKnown RBP30.39■■■□□ 2.46
KHSRP-213ENST00000619396 PGFP49763 221 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms