RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TMEM253P0C7T8 217 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ITPRIPL1Q6GPH6 555 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SPOCD1Q6ZMY3 1216 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CCDC60Q8IWA6 550 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PPP3R2Q96LZ3 170 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TMX2-CTNND1H3BSU7 103 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CCL22O00626 93 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CYP3A5P20815 502 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CLEC4GQ6UXB4 293 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZBED8Q8IZ13 594 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC7A5P1Q8MH63 180 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TMC2Q8TDI7 906 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LURAP1Q96LR2 239 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ACOT9Q9Y305 439 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC2A5P22732 501 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PRKAA1Q13131 559 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DPYSQ14117 519 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 XKR8Q9H6D3 395 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CCDC154A6NI56 674 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LRIG2O94898 1065 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 BMP10O95393 424 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC44A2Q8IWA5 706 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF577Q9BSK1 485 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 AHSPQ9NZD4 102 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF335Q9H4Z2 1342 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 RNASEH1O60930 286 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 GNG2P59768 71 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DPP10Q8N608 796 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CLEC4DQ8WXI8 215 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF333Q96JL9 665 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 OMDQ99983 421 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 APEX2Q9UBZ4 518 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FXR2P51116 673 aaKnown RBP eCLIP3.11□□□□□ -1.91
NEB-220ENST00000618972 FRG1Q14331 258 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 DUS1LQ6P1R4 473 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 XRRA1Q6P2D8 792 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CTU1Q7Z7A3 348 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CMTR2Q8IYT2 770 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 ELMOD1Q8N336 334 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 JOSD2Q8TAC2 188 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZC3H10Q96K80 434 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CAB39LQ9H9S4 337 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 IFT80Q9P2H3 777 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 UPB1Q9UBR1 384 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ARHGEF40Q8TER5 1519 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RHPN2P1A8MT19 583 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MRPS14O60783 128 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PMPCBO75439 489 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 HMGN1P05114 100 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 POU2F1P14859 743 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ADORA2AP29274 412 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ACADSBP45954 432 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CD300CQ08708 224 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SPIRE1Q08AE8 756 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ACVR2BQ13705 512 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MOGSQ13724 837 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MARK2Q7KZI7 788 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 FEZF2Q8TBJ5 459 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 AMNQ9BXJ7 453 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 H3BM21 787 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PSMD9O00233 223 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 YES1P07947 543 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RBL1P28749 1068 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NFIL3Q16649 462 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TMEM17Q86X19 198 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 C8orf59Q8N0T1 100 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CPB2Q96IY4 423 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC29A1Q99808 456 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 B3GNT5Q9BYG0 378 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FN3KQ9H479 309 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PCDHGB1Q9Y5G3 927 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MROH7Q68CQ1 1323 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 AQP12BA6NM10 295 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NAT1P18440 290 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GGT5P36269 586 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CAPZA2P47755 286 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FAM187BQ17R55 369 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 KANK2Q63ZY3 851 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ANKRD26P1Q6NSI1 321 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FRMD7Q6ZUT3 714 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF605Q86T29 641 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SCUBE3Q8IX30 993 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FIG4Q92562 907 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CNDP1Q96KN2 507 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SYT11Q9BT88 431 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NUDT5Q9UKK9 219 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PSMD10O75832 226 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PRDX6P30041 224 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TSTA3Q13630 321 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 FAM71AQ8IYT1 594 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RASGEF1CQ8N431 466 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GALNT6Q8NCL4 622 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 GSTCDQ8NEC7 633 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TCP10LQ8TDR4 215 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 OR2B2Q9GZK3 357 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 HDHD2Q9H0R4 259 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ZNF304Q9HCX3 659 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 C1orf112Q9NSG2 853 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MGAT4AQ9UM21 535 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms