RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PCDH20Q8N6Y1 951 aaKnown RBP20.66■□□□□ 0.9
NEK3-208ENST00000618534 LENG1Q96BZ8 264 aaPredicted RBP20.66■□□□□ 0.9
NEK3-208ENST00000618534 SGF29Q96ES7 293 aa20.66■□□□□ 0.9
NEK3-208ENST00000618534 SLC2A11Q9BYW1 496 aa20.66■□□□□ 0.9
NEK3-208ENST00000618534 PHF24Q9UPV7 400 aa20.66■□□□□ 0.9
NEK3-208ENST00000618534 DMTF1Q9Y222 760 aa20.66■□□□□ 0.9
NEK3-208ENST00000618534 PCNTO95613 3336 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 TRPA1O75762 1119 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 HCAR3P49019 387 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 INHBCP55103 352 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 RAB10P61026 200 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 USP41Q3LFD5 358 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 KIAA0319Q5VV43 1072 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 PTAR1Q7Z6K3 402 aaPredicted RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 LCA5Q86VQ0 697 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 EMID1Q96A84 441 aaPredicted RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 MAELQ96JY0 434 aaKnown RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 FTHL17Q9BXU8 183 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 BRD8Q9H0E9 1235 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 BPTFQ12830 3046 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 STRNO43815 780 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 PENKP01210 267 aaPredicted RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 COL6A2P12110 1019 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 IREB2P48200 963 aaKnown RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 INTS6LQ5JSJ4 861 aaKnown RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 GPRIN1Q7Z2K8 1008 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 AMIGO2Q86SJ2 522 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 TXNDC5Q8NBS9 432 aaKnown RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 SPATA22Q8NHS9 363 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 VAT1Q99536 393 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 VTA1Q9NP79 307 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 DDX18Q9NVP1 670 aaKnown RBP20.65■□□□□ 0.9
NEK3-208ENST00000618534 GTSE1Q9NYZ3 720 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 TMCO1Q9UM00 188 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 FIS1Q9Y3D6 152 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 PCDHGA7Q9Y5G6 932 aa20.65■□□□□ 0.9
NEK3-208ENST00000618534 FAM95CA0A1B0GW59 222 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 NCAM1P13591 858 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 YBX3P16989 372 aaKnown RBP eCLIP20.64■□□□□ 0.89
NEK3-208ENST00000618534 ZNF26P17031 533 aaPredicted RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 IGFBP6P24592 240 aaPredicted RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 CLCN2P51788 898 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 DAOAP59103 153 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 PSME3P61289 254 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 PRPSAP1Q14558 356 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 POU6F1Q14863 301 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 NRF1Q16656 503 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 MGAT5BQ3V5L5 792 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 SPNS2Q8IVW8 549 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 EME1Q96AY2 570 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 MRPL1Q9BYD6 325 aaKnown RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 PCDHAC1Q9H158 963 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 SEMA6AQ9H2E6 1030 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 HSFX1Q9UBD0 423 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 PIN4Q9Y237 131 aaKnown RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 HSPA1AP0DMV8 641 aaKnown RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 HSPA1BP0DMV9 641 aaKnown RBP20.64■□□□□ 0.89
NEK3-208ENST00000618534 STMN1P16949 149 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 WSCD1Q658N2 575 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 CNSTQ6PJW8 725 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 DPF3Q92784 378 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 ASB9Q96DX5 294 aa20.64■□□□□ 0.89
NEK3-208ENST00000618534 NEMP2A6NFY4 417 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 TRPC5OSA6NMA1 111 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 C9IYK1 514 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 E7ENX8 843 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 TMCC1O94876 653 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 FAM200BP0CF97 657 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 HNRNPLP14866 589 aaKnown RBP eCLIP20.63■□□□□ 0.892e-21■■□□□ 11.7
NEK3-208ENST00000618534 DARSP14868 501 aaKnown RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 CREB5Q02930 508 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 EML3Q32P44 896 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 ZNF792Q3KQV3 632 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 PKN3Q6P5Z2 889 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 PELI3Q8N2H9 469 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 CEP70Q8NHQ1 597 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 HMGCLL1Q8TB92 370 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 OSBPL2Q9H1P3 480 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 MRPL46Q9H2W6 279 aaKnown RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 POMKQ9H5K3 350 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 EPS15L1Q9UBC2 864 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 C7orf72A4D263 438 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 NPHS1O60500 1241 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 LRIG2O94898 1065 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 MT-CYBP00156 380 aaPredicted RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 MMP3P08254 477 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 USP17L7P0C7H9 530 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 KCNE1P15382 129 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 RANBP1P43487 201 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 PDAP1Q13442 181 aaKnown RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 UGP2Q16851 508 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 TMEM259Q4ZIN3 620 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 ESRP1Q6NXG1 681 aaKnown RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 LINC00523Q86TU6 105 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 CHERPQ8IWX8 916 aaKnown RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 TOP6BLQ8N6T0 577 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 COLEC11Q9BWP8 271 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.63■□□□□ 0.89
NEK3-208ENST00000618534 OR12D3Q9UGF7 316 aa20.63■□□□□ 0.89
NEK3-208ENST00000618534 KCNH4Q9UQ05 1017 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms