RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SLC34A3Q8N130 599 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 TMEM8AQ9HCN3 771 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 MEMO1Q9Y316 297 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ERI2A8K979 691 aaKnown RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 SNRNP35Q16560 246 aaKnown RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 SPERTQ8NA61 448 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 SRFBP1Q8NEF9 429 aaKnown RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 BBS4Q96RK4 519 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 KCND1Q9NSA2 647 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CBY1Q9Y3M2 126 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ABCB11O95342 1321 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 HSD3B2P26439 372 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ELMO1Q92556 727 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PIGKQ92643 395 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ACOX2Q99424 681 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PAK6Q9NQU5 681 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 TAS2R7Q9NYW3 318 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 TRIP11Q15643 1979 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 RORCP51449 518 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 UGT2B15P54855 530 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 CAMK2GQ13555 558 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PLEKHG4Q58EX7 1191 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 FAM13CQ8NE31 585 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF225Q9UK10 706 aa15.17■□□□□ 0.02
COL5A1-208ENST00000618395 PP2D1A8MPX8 630 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 NAB1Q13506 487 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 ZCCHC23Q6ZST2 131 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 GSTCDQ8NEC7 633 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 CRLS1Q9UJA2 301 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 C12orf71A8MTZ7 269 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 CDH1P12830 882 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 ADRA1DP25100 572 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 RBL1P28749 1068 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 GNA13Q14344 377 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 BOLA3Q53S33 107 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 FAM20CQ8IXL6 584 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 CLP1Q92989 425 aaKnown RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 SMPD3Q9NY59 655 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 ALDH1A2O94788 518 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 ARL3P36405 182 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 TAF13Q15543 124 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 SEC14L1Q92503 715 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 ACTR8Q9H981 624 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 CATSPER4Q7RTX7 472 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 AHSPQ9NZD4 102 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 OAS3Q9Y6K5 1087 aaKnown RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 MUSKO15146 869 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 GRAP2O75791 330 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 GJA1P17302 382 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 LHCGRP22888 699 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 PLEKHG6Q3KR16 790 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 MREGQ8N565 214 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 KCNS3Q9BQ31 491 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 SENP6Q9GZR1 1112 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 DISC1C4P0D8 188 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 DYRK3O43781 588 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 IL32P24001 234 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 SPANXN3Q5MJ09 141 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 TSNAXQ99598 290 aaKnown RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 KCNN2Q9H2S1 579 aa15.16■□□□□ 0.02
COL5A1-208ENST00000618395 RANBP3Q9H6Z4 567 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-208ENST00000618395 TM7SF2O76062 418 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NR4A1P22736 598 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 RNASE12Q5GAN4 147 aaKnown RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 SLC22A16Q86VW1 577 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ZCCHC9Q8N567 271 aaKnown RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF471Q9BX82 626 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 SEC14L4Q9UDX3 406 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 AGAP1Q9UPQ3 857 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 VAPBO95292 243 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 S100A3P33764 101 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 WSCD2Q2TBF2 565 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MFSD7Q6UXD7 560 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MTSS1LQ765P7 747 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 OR56A4Q8NGH8 313 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 DNAJB14Q8TBM8 379 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MUC13Q9H3R2 512 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 SEC22BO75396 215 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 OR6A2O95222 327 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CCNDBP1O95273 360 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 PRAMEF1O95521 474 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms