RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 MS4A13Q5J8X5 152 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 LMNTD2Q8IXW0 634 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 APCDD1Q8J025 514 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
GPC6-202ENST00000617456 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
GPC6-202ENST00000617456 KAT5Q92993 513 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 FCRL2Q96LA5 508 aaPredicted RBP8.76□□□□□ -1.01
GPC6-202ENST00000617456 ZNF578Q96N58 590 aaPredicted RBP8.76□□□□□ -1.01
GPC6-202ENST00000617456 MIS12Q9H081 205 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 CAAP1Q9H8G2 361 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 ST7Q9NRC1 585 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 UCKL1Q9NWZ5 548 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 CYTH4Q9UIA0 394 aa8.76□□□□□ -1.01
GPC6-202ENST00000617456 CXorf51AA0A1B0GTR3 108 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 A0A1B0GVM2 712 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 KCNU1A8MYU2 1149 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 EIF3CLB5ME19 914 aaKnown RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 SLC31A1O15431 190 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 LATO43561 262 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 MAGEC1O60732 1142 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 HSF2BPO75031 334 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 CSO75390 466 aaKnown RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 MMEP08473 750 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 DGKAP23743 735 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 EEF1GP26641 437 aaKnown RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 CCR1P32246 355 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 DRD3P35462 400 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PLK1P53350 603 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 CDK17Q00537 523 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PDCLQ13371 301 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ZNF211Q13398 564 aaPredicted RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 TPD52L1Q16890 204 aaPredicted RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 DCAF6Q58WW2 860 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 KIAA1614Q5VZ46 1190 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ARCQ7LC44 396 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PRICKLE2Q7Z3G6 844 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 FAM71AQ8IYT1 594 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 SLC25A45Q8N413 288 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ATP6V0D2Q8N8Y2 350 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 CLEC4CQ8WTT0 213 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 TTC9Q92623 222 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PMM1Q92871 262 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 KLK6Q92876 244 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 FAM149B1Q96BN6 582 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 DTNBP1Q96EV8 351 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 WBP1Q96G27 269 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 KLHDC7BQ96G42 594 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 HIC2Q96JB3 615 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 VCPIP1Q96JH7 1222 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PPP1R13BQ96KQ4 1090 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 DEPDC7Q96QD5 511 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 SLC2A13Q96QE2 648 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 EIF3CQ99613 913 aaKnown RBP8.75□□□□□ -1.01
GPC6-202ENST00000617456 NDST4Q9H3R1 872 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 CLSTN2Q9H4D0 955 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 BATF3Q9NR55 127 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ARHGAP20Q9P2F6 1191 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ITM2BQ9Y287 266 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 SLC30A1Q9Y6M5 507 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 PTPN13Q12923 2485 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 ITIH6Q6UXX5 1313 aa8.75□□□□□ -1.01
GPC6-202ENST00000617456 TDRD6O60522 2096 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 BECN2A8MW95 431 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 C10orf142B7Z368 130 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 E5RJQ4 531 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 PRAMEF26H0Y7S4 382 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 THAP12O43422 761 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 LUC7L3O95232 432 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 WISP1O95388 367 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 TRUB2O95900 331 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 F9P00740 461 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 THEGLP0DJG4 465 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 PDGFRAP16234 1089 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 PRLRP16471 622 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 SLC9A1P19634 815 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 CDH5P33151 784 aaPredicted RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 NOS2P35228 1153 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 KRT9P35527 623 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 NNMTP40261 264 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 MTIF2P46199 727 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 GABRB2P47870 512 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 LSSP48449 732 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 CCNHP51946 323 aaPredicted RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 ELAVL3Q14576 367 aaKnown RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 CAMK4Q16566 473 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 C5orf22Q49AR2 442 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 VWA3BQ502W6 1294 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 RABGAP1LQ5R372 815 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 WLSQ5T9L3 541 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 SYPL2Q5VXT5 272 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 DENND1BQ6P3S1 775 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
GPC6-202ENST00000617456 SLC26A9Q7LBE3 791 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 IQCHQ86VS3 1027 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 CHSY1Q86X52 802 aa8.74□□□□□ -1.01
GPC6-202ENST00000617456 ZNF677Q86XU0 584 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms