RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PPP1R14BQ96C90 147 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 Q96MT0 163 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CADM1Q9BY67 442 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SLC7A5P2Q9GIP4 190 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 POPDC2Q9HBU9 364 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CNTNAP4Q9C0A0 1308 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 LGR5O75473 907 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SERPINA1P01009 418 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 NOS3P29474 1203 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GRK3P35626 688 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GJA8P48165 433 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 KPNA1P52294 538 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 INSCQ1MX18 579 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PAGE2BQ5JRK9 111 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GCNT7Q6ZNI0 430 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 EIF3MQ7L2H7 374 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CLYBLQ8N0X4 340 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PDPRQ8NCN5 879 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SLC2A14Q8TDB8 520 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 WNT8BQ93098 351 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PRMT6Q96LA8 375 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 KLHL32Q96NJ5 620 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 DOLKQ9UPQ8 538 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 BBIP1A8MTZ0 92 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 H3BMM5 538 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CCNKO75909 580 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 NPR3P17342 541 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 NOS2P35228 1153 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GSTM5P46439 218 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 LGALS3BPQ08380 585 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 KCTD19Q17RG1 926 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 MFSD4BQ5TF39 518 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CRTC3Q6UUV7 619 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PROSER1Q86XN7 944 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF671Q8TAW3 534 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ADAM32Q8TC27 787 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PPP3R2Q96LZ3 170 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 NPAS2Q99743 824 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SSU72Q9NP77 194 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PNPLA8Q9NP80 782 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ING3Q9NXR8 418 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 KLQ9UEF7 1012 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 FAM50BQ9Y247 325 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ATP6AP2A0A1C7CYW4 349 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 LACTBL1A8MY62 500 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ATP6AP2O75787 350 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 TGFB3P10600 412 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 IDO1P14902 403 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF12P17014 697 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 HOXB6P17509 224 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ALDH9A1P49189 494 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 RAB25P57735 213 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 RAB15P59190 212 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 PRKCQQ04759 706 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 C6orf52Q5T4I8 152 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GLT6D1Q7Z4J2 308 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 IZUMO1Q8IYV9 350 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ARL10Q8N8L6 244 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 GPRC5AQ8NFJ5 357 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 TRMOQ9BU70 441 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CAPN10Q9HC96 672 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 TRMT13Q9NUP7 481 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 RPS6KB2Q9UBS0 482 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 ZNF112Q9UJU3 913 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 SLC12A4Q9UP95 1085 aa10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 COL3A1P02461 1466 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-209ENST00000617103 CYP3A7-CYP3A51PA0A087WV96 503 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 BTN3A3O00478 584 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 TPD52L2O43399 206 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 COX7A2P14406 83 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 DARSP14868 501 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 CYP3A7P24462 503 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 HPCAL1P37235 193 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 RTP1P59025 263 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 FSCN1Q16658 493 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 PYDC2Q56P42 97 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 UTS2BQ765I0 119 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 DSELQ8IZU8 1212 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 STK40Q8N2I9 435 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 LRRC57Q8N9N7 239 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 VPS35Q96QK1 796 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 EFR3BQ9Y2G0 817 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 STON1Q9Y6Q2 735 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 SPTLC1O15269 473 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 SIN3BO75182 1162 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 HNRNPLP14866 589 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 POLD2P49005 469 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 NUMBP49757 651 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 SERPINB11Q96P15 392 aa10.75□□□□□ -0.69
CLTCL1-209ENST00000617103 YIPF2Q9BWQ6 316 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms