RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NRG1Q02297 640 aaPredicted RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 GNA12Q03113 381 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 OVGP1Q12889 678 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 LBRQ14739 615 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 C9orf50Q5SZB4 431 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 ADGRF1Q5T601 910 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 HHATQ5VTY9 493 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 RNF219Q5W0B1 726 aaPredicted RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 PACS1Q6VY07 963 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 STRA8Q7Z7C7 330 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 NDUFAF2Q8N183 169 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.9□□□□□ -1.14
NEK3-207ENST00000617054 MYLIPQ8WY64 445 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 MOCOSQ96EN8 888 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 MUC3BQ9H195 1237 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 AAR2Q9Y312 384 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 KIAA1671Q9BY89 1806 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 CCDC195A0A1B0GUA6 201 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 TPP1O14773 563 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SPAG6O75602 509 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 KRT37O76014 449 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 ALDH1A2O94788 518 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 MT-CO1P00395 513 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 C1RP00736 705 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 ALDOAP04075 364 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 HTRA4P83105 476 aaPredicted RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 PDE1BQ01064 536 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 HNRNPDQ14103 355 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 SPRED3Q2MJR0 410 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SNX30Q5VWJ9 437 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 NAPEPLDQ6IQ20 393 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 TIGD7Q6NT04 549 aaPredicted RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 CGB2Q6NT52 195 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 TMEM135Q86UB9 458 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SPATA6LQ8N4H0 392 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 PDZD8Q8NEN9 1154 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 OR6K2Q8NGY2 324 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 SRPK1Q96SB4 655 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 SUDS3Q9H7L9 328 aaPredicted RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 ATP13A1Q9HD20 1204 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 TLR9Q9NR96 1032 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 FNDC3AQ9Y2H6 1198 aaKnown RBP7.9□□□□□ -1.14
NEK3-207ENST00000617054 FAM169AQ9Y6X4 670 aa7.9□□□□□ -1.14
NEK3-207ENST00000617054 OR51F1A6NGY5 319 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 H0Y626 953 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 K7ERQ8 282 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 AURKAO14965 403 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 GRM6O15303 877 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 PRPF4O43172 522 aaKnown RBP eCLIP7.9□□□□□ -1.15
NEK3-207ENST00000617054 CACNG3O60359 315 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 EPCAMP16422 314 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 HOXD9P28356 352 aaPredicted RBP7.9□□□□□ -1.15
NEK3-207ENST00000617054 ADRA1AP35348 466 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 PPM1AP35813 382 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 AVPR1AP37288 418 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 NR1H3Q13133 447 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 PPIGQ13427 754 aaKnown RBP eCLIP7.9□□□□□ -1.152e-7■■■□□ 17.9
NEK3-207ENST00000617054 CAMK1Q14012 370 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 ZNF460Q14592 562 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 TEDDM1Q5T9Z0 273 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 RNF187Q5TA31 235 aaPredicted RBP7.9□□□□□ -1.15
NEK3-207ENST00000617054 STEAP4Q687X5 459 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 RANBP10Q6VN20 620 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 KCNMB4Q86W47 210 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 BBS7Q8IWZ6 715 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 RIN3Q8TB24 985 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 PDCD6IPQ8WUM4 868 aaKnown RBP7.9□□□□□ -1.15
NEK3-207ENST00000617054 RAD9AQ99638 391 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 SLC46A2Q9BY10 475 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 MTO1Q9Y2Z2 717 aaKnown RBP7.9□□□□□ -1.15
NEK3-207ENST00000617054 ACTL7BQ9Y614 415 aa7.9□□□□□ -1.15
NEK3-207ENST00000617054 MYLKQ15746 1914 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.89□□□□□ -1.15
NEK3-207ENST00000617054 C2orf71A6NGG8 1288 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 A6NNZ2 444 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 COPEO14579 308 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ANXA9O76027 345 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 RHOCP08134 193 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ITGA2BP08514 1039 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 NEFHP12036 1026 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 BMPR1AP36894 532 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 KPNA1P52294 538 aaPredicted RBP7.89□□□□□ -1.15
NEK3-207ENST00000617054 MPP1Q00013 466 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 IL9RQ01113 521 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ZNF177Q13360 481 aaPredicted RBP7.89□□□□□ -1.15
NEK3-207ENST00000617054 ZNF235Q14590 738 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ANO4Q32M45 955 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 TUBB8Q3ZCM7 444 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 LILRA6Q6PI73 481 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 POTEHQ6S545 545 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ARRDC2Q8TBH0 407 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 CLP1Q92989 425 aaKnown RBP7.89□□□□□ -1.15
NEK3-207ENST00000617054 IMP4Q96G21 291 aaKnown RBP7.89□□□□□ -1.15
NEK3-207ENST00000617054 IL22Q9GZX6 179 aa7.89□□□□□ -1.15
NEK3-207ENST00000617054 ALG2Q9H553 416 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms