RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 OR13H1Q8NG92 308 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 KLK6Q92876 244 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 SGF29Q96ES7 293 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 KREMEN1Q96MU8 473 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 DNAI1Q9UI46 699 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 SARDHQ9UL12 918 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 INTUQ9ULD6 942 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 PCDHB4Q9Y5E5 795 aa18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 NYNRINQ9P2P1 1898 aaKnown RBP18.01■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 CPED1A4D0V7 1026 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 NEMP2A6NFY4 417 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 RNGTTO60942 597 aaKnown RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 MOCS3O95396 460 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 GJB6O95452 261 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 ITGB2P05107 769 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 NUMBP49757 651 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 PTK2Q05397 1052 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 CNTN1Q12860 1018 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 SRSF6Q13247 344 aaKnown RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 NUGGCQ68CJ6 796 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 GUSBP11Q6P575 273 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 CRTC1Q6UUV9 634 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF677Q86XU0 584 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 CCDC117Q8IWD4 279 aaPredicted RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 UNC45BQ8IWX7 931 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 RNF10Q8N5U6 811 aaKnown RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 WDR36Q8NI36 951 aaKnown RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 SHC3Q92529 594 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 DUSP23Q9BVJ7 150 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 ABCC13Q9NSE7 274 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 SEPT11Q9NVA2 429 aaKnown RBP18■□□□□ 0.47
TRAPPC3-209ENST00000616395 SEPT3Q9UH03 358 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 TSPAN16Q9UKR8 245 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 GUCA1BQ9UMX6 200 aa18■□□□□ 0.47
TRAPPC3-209ENST00000616395 TYW5A2RUC4 315 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 FOXN3O00409 490 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 KRT5P13647 590 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 MLLT3P42568 568 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 TERF1P54274 439 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 NAP1L1P55209 391 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF569Q5MCW4 686 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 MSANTD2Q6P1R3 559 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 ALKBH5Q6P6C2 394 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 EFL1Q7Z2Z2 1120 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 TRIM58Q8NG06 486 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 TFAP2BQ92481 460 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 NOX5Q96PH1 765 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZSWIM1Q9BR11 485 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 PDCL3Q9H2J4 239 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 FZD3Q9NPG1 666 aa17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 AJAP1Q9UKB5 411 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 USP9XQ93008 2570 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-209ENST00000616395 XPO1O14980 1071 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 PJA2O43164 708 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 LUC7L3O95232 432 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 ITGA2BP08514 1039 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 PLEKP08567 350 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 H2AFZP0C0S5 128 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 SFTPCP11686 197 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 CR2P20023 1033 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 BRD2P25440 801 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 CLDN2P57739 230 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 TAS2R38P59533 333 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 TGIF1Q15583 401 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 ASTE1Q2TB18 679 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZCCHC8Q6NZY4 707 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 H2AFVQ71UI9 128 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 FAM71AQ8IYT1 594 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 SLC22A18ASQ8N1D0 253 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 UBA3Q8TBC4 463 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 FRS2Q8WU20 508 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 AZIN2Q96A70 460 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 AGPAT1Q99943 283 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 SEMA3CQ99985 751 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 PREBQ9HCU5 417 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 A0A1W2PQU0 124 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 O00370 1275 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 CASC3O15234 703 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 NOBOXO60393 691 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 NNMTP40261 264 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 INHBCP55103 352 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 TBX4P57082 545 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 MS4A13Q5J8X5 152 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 FAM46CQ5VWP2 391 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 ZNF571Q7Z3V5 609 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 DSG4Q86SJ6 1040 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 SIX6OS1Q8N1H7 587 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 CTNNBL1Q8WYA6 563 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 IFT43Q96FT9 208 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 DDX50Q9BQ39 737 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 ACP6Q9NPH0 428 aa17.98■□□□□ 0.47
TRAPPC3-209ENST00000616395 DOCK9Q9BZ29 2069 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 BSNQ9UPA5 3926 aa17.97■□□□□ 0.47
TRAPPC3-209ENST00000616395 CCDC187A0A096LP49 1063 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms