RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MSH3P20585 1137 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NEPROQ6NW34 567 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 PDZD4Q76G19 769 aaPredicted RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 AMIGO1Q86WK6 493 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ALDH16A1Q8IZ83 802 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 OR9Q1Q8NGQ5 310 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FBXO30Q8TB52 745 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 CAB39LQ9H9S4 337 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 AGO2Q9UKV8 859 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 PXDNQ92626 1479 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NUAK1O60285 661 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 HUS1O60921 280 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 PGLSO95336 258 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 APOC2P02655 101 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 IL1R1P14778 569 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 TFEBP19484 476 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ELK4P28324 431 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FAM98BQ52LJ0 330 aaKnown RBP13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 ARHGAP36Q6ZRI8 547 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 NLRP4Q96MN2 994 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FERD3LQ96RJ6 166 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLC17A6Q9P2U8 582 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 PDE10AQ9Y233 779 aa13.7□□□□□ -0.22
PPP4R3B-205ENST00000616288 H0YC42 278 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 SH3BP5O60239 455 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 YES1P07947 543 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 IL7RP16871 459 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 TSPAN8P19075 237 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CYP4F2P78329 520 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CYP4F3Q08477 520 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF276Q8N554 614 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ASB12Q8WXK4 309 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CENPNQ96H22 339 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ACE2Q9BYF1 805 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 GMIPQ9P107 970 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 GAKO14976 1311 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 TBX3O15119 743 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CHRNGP07510 517 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CD247P20963 164 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 KDELR1P24390 212 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 RHDQ02161 417 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 SEZ6Q53EL9 994 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CCBE1Q6UXH8 406 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 RNF111Q6ZNA4 994 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 GRAMD2AQ8IUY3 354 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 MIER2Q8N344 545 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF606Q8WXB4 792 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 MSANTD3Q96H12 275 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 GAD1Q99259 594 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CTRCQ99895 268 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ARHGEF4Q9NR80 690 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLITRK3O94933 977 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 CYP4B1P13584 511 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLC26A3P40879 764 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 ARL13AQ5H913 290 aaPredicted RBP13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 USP43Q70EL4 1123 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 C19orf18Q8NEA5 215 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 U3KQV3 271 aa13.69□□□□□ -0.22
PPP4R3B-205ENST00000616288 MEN1O00255 615 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SNX19Q92543 992 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CD101Q93033 1021 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 MED30Q96HR3 178 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 FRMD8P1Q9BZ68 369 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 PNPLA8Q9NP80 782 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CORINQ9Y5Q5 1042 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CD4P01730 458 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TSHRP16473 764 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TAL1P17542 331 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 GCAP28676 217 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TMBIM6P55061 237 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 BNIP2Q12982 314 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TBRG1Q3YBR2 411 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SCML4Q8N228 414 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 JPH3Q8WXH2 748 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms