RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C3orf62Q6ZUJ4 267 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TMC7Q7Z402 723 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 HID1Q8IV36 788 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 MARCH10Q8NA82 808 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CD300LFQ8TDQ1 290 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 KIAA1143Q96AT1 154 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GAREM1Q9H706 876 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 DLG5Q8TDM6 1919 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GPR75-ASB3A0A0A6YYF3 556 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FCHO1O14526 889 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TPPPO94811 219 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GDF11O95390 407 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 BCAR1P56945 870 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FOLH1Q04609 750 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RAD51Q06609 339 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GALNTL6Q49A17 601 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 BEND5Q7L4P6 421 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SETD6Q8TBK2 473 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SHCBP1LQ9BZQ2 653 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 MAB21L2Q9Y586 359 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 AAGABQ6PD74 315 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FBXO30Q8TB52 745 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PTPRN2Q92932 1015 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 KAZALD1Q96I82 304 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 MSTO1Q9BUK6 570 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ADPRHL2Q9NX46 363 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PPP4R1LQ9P1A2 415 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF223Q9UK11 482 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RIMBP3CA6NJZ7 1639 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RIMBP3BA6NNM3 1639 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RIMBP3Q9UFD9 1639 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 BTNL10A8MVZ5 291 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CLDN3O15551 220 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 EPCAMP16422 314 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GTF2E2P29084 291 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 WDR59Q6PJI9 974 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CCNJLQ8IV13 435 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 DAW1Q8N136 415 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ITFG1Q8TB96 612 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 KCNS3Q9BQ31 491 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 LXNQ9BS40 222 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PRMT8Q9NR22 394 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 A0A087WWV3 80 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FPGTO14772 594 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RAB7AP51149 207 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PITPNAQ00169 270 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ANKDD1AQ495B1 522 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CAND1Q86VP6 1230 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 BPIFB6Q8NFQ5 453 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 EIF2AK1Q9BQI3 630 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CLIC2O15247 247 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CAMTA2O94983 1202 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SCARF1Q14162 830 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 AGAP9Q5VTM2 703 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PDPK2PQ6A1A2 396 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 C3orf58Q8NDZ4 430 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TPD52L3Q96J77 140 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 LUMP51884 338 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ARFIP1P53367 373 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PRMT2P55345 433 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CRADDP78560 199 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 HIST2H2ACQ16777 129 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FAM83EQ2M2I3 478 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 HIST2H2AA3Q6FI13 130 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TTI2Q6NXR4 508 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 KIF18BQ86Y91 864 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 C1orf54Q8WWF1 131 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FIG4Q92562 907 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TSNAXQ99598 290 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GJB4Q9NTQ9 266 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ANKEF1Q9NU02 776 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 CKLFQ9UBR5 152 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SLC9A2Q9UBY0 812 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 DOCK8Q8NF50 2099 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SEC16AO15027 2179 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RP2O75695 350 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 NKX6-1P78426 367 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 HES5Q5TA89 166 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SNRNP48Q6IEG0 339 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 MKL1Q969V6 931 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FAM120BQ96EK7 910 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GAL3ST1Q99999 423 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 GMIPQ9P107 970 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 HOXB6P17509 224 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 SEC23AQ15436 765 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 TMEM53Q6P2H8 277 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF518BQ9C0D4 1074 aa9.36□□□□□ -0.91
COL12A1-211ENST00000615798 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
COL12A1-211ENST00000615798 FADS3Q9Y5Q0 445 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms