RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NSL1Q96IY1 281 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ECSITQ9BQ95 431 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CHCHD3Q9NX63 227 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 FBXW11Q9UKB1 542 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 STRCP1A6NGW2 1772 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 YJEFN3A6XGL0 299 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 B2RBV5 119 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 E7ENQ6 273 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 MFSD11O43934 449 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ANXA5P08758 320 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 GPD2P43304 727 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 COPAP53621 1224 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 POLE2P56282 527 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ERVK-21P61565 698 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 GALNT3Q14435 633 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PAGE2BQ5JRK9 111 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CEP68Q76N32 757 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 RTL3Q8N8U3 475 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 WFIKKN2Q8TEU8 576 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TTYH3Q9C0H2 523 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 OPTCQ9UBM4 332 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 SOX13Q9UN79 622 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PER2O15055 1255 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 FGF18O76093 207 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 SOD2P04179 222 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ABHD2P08910 425 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 LTA4HP09960 611 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 THRAP10827 490 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CHRNB2P17787 502 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CDH2P19022 906 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 BGNP21810 368 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TNFRSF8P28908 595 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 DGKGP49619 791 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CYP4F8P98187 520 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 SLC39A5Q6ZMH5 540 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 UNC5AQ6ZN44 842 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 KCTD13Q8WZ19 329 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 DACT3Q96B18 629 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CXorf40BQ96DE9 158 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PPP1R10Q96QC0 940 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 COPS8Q99627 209 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 BPIFA1Q9NP55 256 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 IL23AQ9NPF7 189 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 CLDND1Q9NY35 253 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 VTI1BQ9UEU0 232 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 NAV1Q8NEY1 1877 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 A0A088AWK7 358 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 A0A0U1RQJ8 604 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 LOC100653049A0A140TA62 436 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PFDN1O60925 122 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 KRT34O76011 436 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 EPHX1P07099 455 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 ZNF10P21506 573 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 FSHRP23945 695 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 SKIV2L2P42285 1042 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 NAA20P61599 178 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 GPR17Q13304 367 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 MSLNQ13421 630 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 MILR1Q7Z6M3 343 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TBC1D3Q8IZP1 549 aaPredicted RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 PLD5Q8N7P1 536 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 AENQ8WTP8 325 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 C8orf48Q96LL4 319 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 QKIQ96PU8 341 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 BCO2Q9BYV7 579 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 UNKQ9C0B0 810 aaKnown RBP9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 TLR6Q9Y2C9 796 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 GPSM3Q9Y4H4 160 aa9.54□□□□□ -0.88
CLTCL1-208ENST00000615606 BCLAF3A2AJT9 711 aaKnown RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 DNAJC8O75937 253 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 IQCF3P0C7M6 154 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 LRPAP1P30533 357 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SEC24CP53992 1094 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 NCALDP61601 193 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 AP1S1P61966 158 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ICE2Q659A1 982 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 RBFAQ8N0V3 343 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 CCDC185Q8N715 623 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 JADE3Q92613 823 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ART4Q93070 314 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 SHISA4Q96DD7 197 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 MIEF1Q9NQG6 463 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 FBXO6Q9NRD1 293 aaPredicted RBP9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 ERVW-1Q9UQF0 538 aa9.53□□□□□ -0.88
CLTCL1-208ENST00000615606 USP54Q70EL1 1684 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms