RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MYLPFQ96A32 169 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ZNF558Q96NG5 402 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 TMEM237Q96Q45 408 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 SLITRK6Q9H5Y7 841 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 C10orf88Q9H8K7 445 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS11-206ENST00000614944 DPP7Q9UHL4 492 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 POLHQ9Y253 713 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MAD1L1Q9Y6D9 718 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 KRBA1A5PL33 1030 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 CAPN9O14815 690 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MDM4O15151 490 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 PAPLNO95428 1278 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ITGB1P05556 798 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ALOX5P09917 674 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 LINC00271P0C7V0 271 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 PRKAR1BP31321 381 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 RPL5P46777 297 aaKnown RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 MRPS15P82914 257 aaKnown RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 SLC25A11Q02978 314 aaKnown RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 SQLEQ14534 574 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MESDQ14696 234 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 NPTX1Q15818 432 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 HADHQ16836 314 aaKnown RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 USP41Q3LFD5 358 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 DRICH1Q6PGQ1 229 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 IDO2Q6ZQW0 420 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 COLGALT1Q8NBJ5 622 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 PSD4Q8NDX1 1056 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ZMIZ2Q8NF64 920 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 UBA3Q8TBC4 463 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 NTN4Q9HB63 628 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 RCOR3Q9P2K3 495 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 MYBPHLA2RUH7 354 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 K7EPI3 171 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 SIN3BO75182 1162 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ALX3O95076 343 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 FGBP02675 491 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 CSF2RAP15509 400 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 TRIM23P36406 574 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MATKP42679 507 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ARSEP51690 589 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 NEK3P51956 506 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 DCUN1D2Q6PH85 259 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 BHLHA9Q7RTU4 235 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 PIGZQ86VD9 579 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 SPATA4Q8NEY3 305 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 CMASQ8NFW8 434 aaPredicted RBP8.93□□□□□ -0.98
VPS11-206ENST00000614944 MOGAT1Q96PD6 335 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MCEEQ96PE7 176 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 OSBPL6Q9BZF3 934 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MAN1C1Q9NR34 630 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 FAM49BQ9NUQ9 324 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 STMN3Q9NZ72 180 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ZNF212Q9UDV6 495 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ATP6V1HQ9UI12 483 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 ARL2BPQ9Y2Y0 163 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 MYO16Q9Y6X6 1858 aa8.93□□□□□ -0.98
VPS11-206ENST00000614944 A6NL46 340 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 C5orf67F2Z3F1 127 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 RGS13O14921 159 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 EPN2O95208 641 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 CSTF2P33240 577 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS11-206ENST00000614944 HTR7P34969 479 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 RFC1P35251 1148 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 DAOAP59103 153 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 OGDHQ02218 1023 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 UBE3AQ05086 875 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 CD300CQ08708 224 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 ACAD11Q709F0 780 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 C16orf59Q7L2K0 433 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 NET1Q7Z628 596 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 GLRX5Q86SX6 157 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 RALGPS2Q86X27 583 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 FITM2Q8N6M3 262 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 PIP4K2CQ8TBX8 421 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 INPP5DQ92835 1189 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 PRICKLE1Q96MT3 831 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 PRKAG2Q9UGJ0 569 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 POLG2Q9UHN1 485 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 EVLQ9UI08 416 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 APOBEC2Q9Y235 224 aaKnown RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 PCDHB5Q9Y5E4 795 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 KCNK3O14649 394 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 SPOPO43791 374 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 DNAJC6O75061 913 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 IGFBP6P24592 240 aaPredicted RBP8.92□□□□□ -0.98
VPS11-206ENST00000614944 NOS2P35228 1153 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 MTHFRP42898 656 aa8.92□□□□□ -0.98
VPS11-206ENST00000614944 ALDH7A1P49419 539 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms