RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ANO4Q32M45 955 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ATXN7L2Q5T6C5 722 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 TEDDM1Q5T9Z0 273 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 N4BP2L1Q5TBK1 243 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZNF470Q6ECI4 717 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TIGD7Q6NT04 549 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 SH2D5Q6ZV89 423 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 OTOAQ7RTW8 1153 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PIGWQ7Z7B1 504 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DDX53Q86TM3 631 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 NUDCD3Q8IVD9 361 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SLC41A1Q8IVJ1 513 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RNF168Q8IYW5 571 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 EFHBQ8N7U6 833 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ANKS4BQ8N8V4 417 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 KREMEN2Q8NCW0 462 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RFWD2Q8NHY2 731 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PPP1R14CQ8TAE6 165 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 C2orf15Q8WU43 125 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 ING5Q8WYH8 240 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ARMC5Q96C12 935 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TMA16Q96EY4 203 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 IFT43Q96FT9 208 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PPP1R36Q96LQ0 422 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TTLL2Q9BWV7 592 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 NSRP1Q9H0G5 558 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 RC3H2Q9HBD1 1191 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 NOD2Q9HC29 1040 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 IL23AQ9NPF7 189 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 EIF2B3Q9NR50 452 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 TMEM216Q9P0N5 145 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SENP1Q9P0U3 644 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CFAP97Q9P2B7 532 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TSR3Q9UJK0 312 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 VPS28Q9UK41 221 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CCL26Q9Y258 94 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FCF1Q9Y324 198 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 ACTL7BQ9Y614 415 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RAD54BQ9Y620 910 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ARL5AQ9Y689 179 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CAPN7Q9Y6W3 813 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 DRGXA6NNA5 263 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 H0YHG0 523 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 KIAA0355O15063 1070 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SUN1O94901 812 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 HAUS5O94927 633 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZWINTO95229 277 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 EFEMP2O95967 443 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 AHSGP02765 367 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MMP2P08253 660 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 GABRB3P28472 473 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 GP5P40197 560 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CCR2P41597 374 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 NPY2RP49146 381 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ARSDP51689 593 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZNF135P52742 658 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 NDST2P52849 883 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FPGSQ05932 587 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 THOC5Q13769 683 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 USP10Q14694 798 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 PDK4Q16654 411 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SIRPB2Q5JXA9 342 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SPANXN3Q5MJ09 141 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ADGRF1Q5T601 910 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 C1orf53Q5VUE5 145 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CES4AQ5XG92 561 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 FAM219BQ5XKK7 198 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TPGS2Q68CL5 300 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PKN3Q6P5Z2 889 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 RANBP10Q6VN20 620 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TMEM135Q86UB9 458 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 BBS7Q8IWZ6 715 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CMTR2Q8IYT2 770 aaKnown RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 C12orf76Q8N812 135 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 OR13C4Q8NGS5 318 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 POF1BQ8WVV4 589 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 HDAC10Q969S8 669 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 KLF16Q9BXK1 252 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 IL22Q9GZX6 179 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SLC25A51Q9H1U9 297 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 PRDM16Q9HAZ2 1276 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 BPIFA1Q9NP55 256 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 ZNF212Q9UDV6 495 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CDH22Q9UJ99 828 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 TRIM33Q9UPN9 1127 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 CRYL1Q9Y2S2 319 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 USP15Q9Y4E8 981 aaPredicted RBP3.48□□□□□ -1.85
LIG4-205ENST00000614526 HCFC2Q9Y5Z7 792 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 SLC4A7Q9Y6M7 1214 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 MICAL3Q7RTP6 2002 aa3.48□□□□□ -1.85
LIG4-205ENST00000614526 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 A0A096LPK6 155 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 FAM237BA0A1B0GVD1 139 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 TRIM24O15164 1050 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 GPR39O43194 453 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 CAPN15O75808 1086 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 USP1O94782 785 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 ALDH1A2O94788 518 aa3.47□□□□□ -1.85
LIG4-205ENST00000614526 UBOX5O94941 541 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms