RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 MAPRE1Q15691 268 aaKnown RBP16.72■□□□□ 0.27
CNOT3-208ENST00000613073 DDR2Q16832 855 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 GPR152Q8TDT2 470 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 ARNTL2Q8WYA1 636 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 B3GALT6Q96L58 329 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 APOL2Q9BQE5 337 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 CCDC106Q9BWC9 280 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 PFDN4Q9NQP4 134 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 BPTFQ12830 3046 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 TMEM221A6NGB7 291 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 FAM159BA6NKW6 160 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 MOCS2O96007 188 aaPredicted RBP16.72■□□□□ 0.27
CNOT3-208ENST00000613073 SLC18A2Q05940 514 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 USP33Q8TEY7 942 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 CASP10Q92851 521 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 NMUR1Q9HB89 426 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 INIPQ9NRY2 104 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 HMX2A2RU54 273 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 TOP3BO95985 862 aaKnown RBP16.72■□□□□ 0.27
CNOT3-208ENST00000613073 GRK4P32298 578 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 HCAR3P49019 387 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 KCTD21Q4G0X4 260 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 LGSNQ5TDP6 509 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 CHSY1Q86X52 802 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 MOCS1Q9NZB8 636 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 ZNF180Q9UJW8 692 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 PCDHB8Q9UN66 801 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 DFFAO00273 331 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 TRMUO75648 421 aaKnown RBP16.71■□□□□ 0.27
CNOT3-208ENST00000613073 RFPL1O75677 317 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 F7P08709 466 aaPredicted RBP16.71■□□□□ 0.27
CNOT3-208ENST00000613073 TFPTP0C1Z6 253 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 GARSP41250 739 aaKnown RBP16.71■□□□□ 0.27
CNOT3-208ENST00000613073 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 AAGABQ6PD74 315 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 KYAT3Q6YP21 454 aaKnown RBP16.71■□□□□ 0.27
CNOT3-208ENST00000613073 ARHGAP36Q6ZRI8 547 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 SCD5Q86SK9 330 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 COLGALT2Q8IYK4 626 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 E2F7Q96AV8 911 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 FAM193BQ96PV7 902 aaPredicted RBP16.71■□□□□ 0.27
CNOT3-208ENST00000613073 EPB41L1Q9H4G0 881 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 IGSF9Q9P2J2 1179 aa16.71■□□□□ 0.27
CNOT3-208ENST00000613073 TNFRSF10BO14763 440 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 KRT38O76015 456 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 EOMESO95936 686 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 JCHAINP01591 159 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 INHAP05111 366 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 MLNP12872 115 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 TYMPP19971 482 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 HOXD10P28358 340 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 CD68P34810 354 aaPredicted RBP16.71■□□□□ 0.26
CNOT3-208ENST00000613073 STT3AP46977 705 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 PSMD7P51665 324 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 ATXN3P54252 364 aaPredicted RBP16.71■□□□□ 0.26
CNOT3-208ENST00000613073 ARPP19P56211 112 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 CNGA3Q16281 694 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 AMIGO2Q86SJ2 522 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 DNAAF3Q8N9W5 541 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 URGCPQ8TCY9 931 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 DCUN1D1Q96GG9 259 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 RBM38Q9H0Z9 239 aaKnown RBP16.71■□□□□ 0.26
CNOT3-208ENST00000613073 EIF2B3Q9NR50 452 aaKnown RBP16.71■□□□□ 0.26
CNOT3-208ENST00000613073 HCSTQ9UBK5 93 aa16.71■□□□□ 0.26
CNOT3-208ENST00000613073 A0A1W2PQH9 124 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 MOXD2PA6NHM9 499 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 IRAK2O43187 625 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 TADA2AO75478 443 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 GATMP50440 423 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 DSC1Q08554 894 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 LHX8Q68G74 356 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 NCCRP1Q6ZVX7 275 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-208ENST00000613073 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 OSER1Q9NX31 292 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 PSAT1Q9Y617 370 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 NLRC5Q86WI3 1866 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 PTPRDP23468 1912 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 PAGE1O75459 146 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 ERVK-10P10266 1014 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 NELFEP18615 380 aaKnown RBP16.7■□□□□ 0.26
CNOT3-208ENST00000613073 NFKB1P19838 968 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 GALNT2Q10471 571 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 DEFB107AQ8IZN7 70 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 GALNT4Q8N4A0 578 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 HDAC11Q96DB2 347 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
CNOT3-208ENST00000613073 NCAM2O15394 837 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 DNAJA2O60884 412 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 SOAT2O75908 522 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 MX2P20592 715 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 CYTH1Q15438 398 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 HSP90AA5PQ58FG0 334 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 FAM91A1Q658Y4 838 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
CNOT3-208ENST00000613073 CRLF3Q8IUI8 442 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms