RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	DNAJB13	P59910	316 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	PLOD1	Q02809	727 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	PSMD5	Q16401	504 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	UGP2	Q16851	508 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	LY6K	Q17RY6	165 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	INTS11	Q5TA45	600 aa	Known RBP	13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	ELMSAN1	Q6PJG2	1045 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	ERMP1	Q7Z2K6	904 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	BORCS5	Q969J3	196 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	C12orf43	Q96C57	262 aa	Known RBP	13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	KIF12	Q96FN5	646 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	HSFY1	Q96LI6	401 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	EBF1	Q9UH73	591 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	PAIP2B	Q9ULR5	123 aa	Known RBP	13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	NME7	Q9Y5B8	376 aa		13.91	□□□□□ -0.18
UBE2F-223	ENST00000612130	KANSL1L	A0AUZ9	987 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TMEM221	A6NGB7	291 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	KCNK1	O00180	336 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	PLOD2	O00469	737 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	FBP2	O00757	339 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	NCAM2	O15394	837 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	MTSS1	O43312	755 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	HBP1	O60381	514 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	DAB1	O75553	588 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	SRP72	O76094	671 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	IDO1	P14902	403 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	VARS	P26640	1264 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	KPNA2	P52292	529 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CDH15	P55291	814 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	NME5	P56597	212 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CXCL9	Q07325	125 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	FASTK	Q14296	549 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CERCAM	Q5T4B2	595 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	ITPRIPL1	Q6GPH6	555 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	OR2T34	Q8NGX1	318 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	OR2T3	Q8NH03	318 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	HMGCLL1	Q8TB92	370 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	DOK1	Q99704	481 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	SLC25A23	Q9BV35	468 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	MRPL46	Q9H2W6	279 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	NOL11	Q9H8H0	719 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TRPC7	Q9HCX4	862 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TMEM181	Q9P2C4	612 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	ACOT9	Q9Y305	439 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TANC1	Q9C0D5	1861 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	MYO18A	Q92614	2054 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TRIP11	Q15643	1979 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	SOWAHB	A6NEL2	793 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TMEM233	B4DJY2	109 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	PSMD12	O00232	456 aa	Predicted RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	AKAP10	O43572	662 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	PHEX	P78562	749 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	RALGDS	Q12967	914 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	ZBTB17	Q13105	803 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CELF3	Q5SZQ8	465 aa	Known RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TSTD2	Q5T7W7	516 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	DHFR2	Q86XF0	187 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CCNYL1	Q8N7R7	359 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	NETO2	Q8NC67	525 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	GIPC3	Q8TF64	312 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	SGF29	Q96ES7	293 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	MLPH	Q9BV36	600 aa	Predicted RBP	13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	BRD8	Q9H0E9	1235 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	SNX25	Q9H3E2	840 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	MEAF6	Q9HAF1	191 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	CHRAC1	Q9NRG0	131 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	TRHDE	Q9UKU6	1024 aa		13.9	□□□□□ -0.18
UBE2F-223	ENST00000612130	PLXNA1	Q9UIW2	1896 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	EEF2K	O00418	725 aa	Known RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	SOCS2	O14508	198 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	MRAS	O14807	208 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	C22orf31	O95567	290 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	SNRPB2	P08579	225 aa	Known RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	PDGFRB	P09619	1106 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	ZNF12	P17014	697 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	ARF4	P18085	180 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	ZNF280A	P59817	542 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	RAB10	P61026	200 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	PRKCQ	Q04759	706 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	OTUD1	Q5VV17	481 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	TTC33	Q6PID6	262 aa	Predicted RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	BNIPL	Q7Z465	357 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	CAMK1D	Q8IU85	385 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	CNTN4	Q8IWV2	1026 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	SPPL2B	Q8TCT7	592 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	PPWD1	Q96BP3	646 aa	Known RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	CPB2	Q96IY4	423 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	GPR78	Q96P69	363 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	APBA2	Q99767	749 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	C8orf4	Q9NR00	106 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	GTSE1	Q9NYZ3	720 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	CROT	Q9UKG9	612 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	TDRKH	Q9Y2W6	561 aa	Known RBP	13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	DERA	Q9Y315	318 aa		13.89	□□□□□ -0.19
UBE2F-223	ENST00000612130	UBD	O15205	165 aa		13.88	□□□□□ -0.19
UBE2F-223	ENST00000612130	ARIH2	O95376	493 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms