RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ALG6Q9Y672 507 aa14.5□□□□□ -0.09
HDDC2-209ENST00000609477 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.5□□□□□ -0.09
HDDC2-209ENST00000609477 LAMA1P25391 3075 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 DMXL1Q9Y485 3027 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3DA0A087WVF3 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3IA0A087WXS9 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3EA0A087X179 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3KA0A087X1G2 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 A0A1W2PPC4 97 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 LNP1A1A4G5 178 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3FA6NER0 549 aaPredicted RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TMEM110-MUSTN1A8MSY1 372 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3LB9A6J9 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 KRIT1O00522 736 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 LATO43561 262 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 AP1G1O43747 822 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 SPOPO43791 374 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 IGHV4-34P06331 123 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3HP0C7X1 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ZFXP17010 805 aaPredicted RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 MX2P20592 715 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 COMTP21964 271 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 MAPK8P45983 427 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 AFF3P51826 1226 aaKnown RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 NEK3P51956 506 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 VAV2P52735 878 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 IRX4P78413 519 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 CYTH1Q15438 398 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 CCDC6Q16204 474 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 IFI16Q16666 785 aaKnown RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 RALGPS1Q5JS13 557 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 PIP5KL1Q5T9C9 394 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3GQ6DHY5 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3CQ6IPX1 549 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 RAD9BQ6WBX8 426 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 PRPF39Q86UA1 669 aaKnown RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TBC1D3Q8IZP1 549 aaPredicted RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 RYBPQ8N488 228 aaPredicted RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ATPAF2Q8N5M1 289 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 SPC24Q8NBT2 197 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 PCDH19Q8TAB3 1148 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 GRIN3AQ8TCU5 1115 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 NSMCE1Q8WV22 266 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 UBE2Q2Q8WVN8 375 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 SKA1Q96BD8 255 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ZNF641Q96N77 438 aaPredicted RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 PSKH2Q96QS6 385 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 TUBGCP5Q96RT8 1024 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ZDHHC6Q9H6R6 413 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ETNK2Q9NVF9 386 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 HAUS2Q9NVX0 235 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 DLL3Q9NYJ7 618 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 DKK3Q9UBP4 350 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 SEPT3Q9UH03 358 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 EIF2B4Q9UI10 523 aaKnown RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 CDV3Q9UKY7 258 aaKnown RBP14.49□□□□□ -0.09
HDDC2-209ENST00000609477 DMTF1Q9Y222 760 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 ACTL7AQ9Y615 435 aa14.49□□□□□ -0.09
HDDC2-209ENST00000609477 FAM47DPA6NHR8 397 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 ARHGAP33O14559 1287 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 BUB1BO60566 1050 aaPredicted RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 MAFKO60675 156 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 RNGTTO60942 597 aaKnown RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 FSBPO95073 299 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 CFIP05156 583 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 CD48P09326 243 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 ADRB3P13945 408 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 GJC1P36383 396 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 METAP1P53582 386 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 RACK1P63244 317 aaKnown RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 MMRN1Q13201 1228 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 PUM1Q14671 1186 aaKnown RBP eCLIP14.48□□□□□ -0.094e-6■□□□□ 9.7
HDDC2-209ENST00000609477 LBRQ14739 615 aaKnown RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 TEAD4Q15561 434 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 TIGD7Q6NT04 549 aaPredicted RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 FBXL19Q6PCT2 694 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 GDPD4Q6W3E5 623 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 LEKR1Q6ZMV7 388 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 CCDC112Q8NEF3 446 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 RAPGEF5Q92565 580 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 ARRDC3Q96B67 414 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 RNF157Q96PX1 679 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 RTKNQ9BST9 563 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 CINPQ9BW66 212 aaPredicted RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 MAK16Q9BXY0 300 aaKnown RBP14.48□□□□□ -0.09
HDDC2-209ENST00000609477 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 AMACRQ9UHK6 382 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 PI4KAP42356 2102 aa14.48□□□□□ -0.09
HDDC2-209ENST00000609477 ATXN2Q99700 1313 aaKnown RBP14.47□□□□□ -0.09
HDDC2-209ENST00000609477 NUMA1Q14980 2115 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.47□□□□□ -0.09
HDDC2-209ENST00000609477 LRRD1A4D1F6 860 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 PATE3B3GLJ2 98 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 SLC30A4O14863 429 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 TSPAN6O43657 245 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 CCNCP24863 283 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 MAOBP27338 520 aa14.47□□□□□ -0.09
HDDC2-209ENST00000609477 GARSP41250 739 aaKnown RBP14.47□□□□□ -0.09
HDDC2-209ENST00000609477 GRIA4P48058 902 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms