RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 SEC14L2O76054 403 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 PGM3O95394 542 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 NR2F1P10589 423 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 GLULP15104 373 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 CCKARP32238 428 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 ICAM3P32942 547 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 RPS6KA3P51812 740 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 EIF3BP55884 814 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 SNX16P57768 344 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 ID2Q02363 134 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 CCDC15Q0P6D6 951 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 STK4Q13043 487 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 SLC9B1Q4ZJI4 515 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 CYP20A1Q6UW02 462 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 PRPF39Q86UA1 669 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 TAGAPQ8N103 731 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 C12orf76Q8N812 135 aaPredicted RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 ENDOVQ8N8Q3 282 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 SRFBP1Q8NEF9 429 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 ZNF548Q8NEK5 533 aaPredicted RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 EDC3Q96F86 508 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 PERPQ96FX8 193 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 HTATIP2Q9BUP3 242 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 FTOQ9C0B1 505 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 HEY2Q9UBP5 337 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 LIMA1Q9UHB6 759 aaKnown RBP5.86□□□□□ -1.47
LINC00458-206ENST00000607494 VPS4AQ9UN37 437 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 KCNE2Q9Y6J6 123 aa5.86□□□□□ -1.47
LINC00458-206ENST00000607494 LIPT2A6NK58 231 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 PER2O15055 1255 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 BEST1O76090 585 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 CBSLP0DN79 551 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 PRPH2P23942 346 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 DUSP1P28562 367 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 CBSP35520 551 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 JAK3P52333 1124 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 RAE1P78406 368 aaKnown RBP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 ZBED6P86452 979 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 NEXNQ0ZGT2 675 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 CDC16Q13042 620 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 PFKFB3Q16875 520 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 LEXMQ3ZCV2 418 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 SH2D4BQ5SQS7 431 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 TMEM63BQ5T3F8 832 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 KRTAP5-11Q6L8G4 156 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 SCN4BQ8IWT1 228 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 WDTC1Q8N5D0 677 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 RAB40AQ8WXH6 277 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 NCSTNQ92542 709 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 CNOT9Q92600 299 aaKnown RBP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 NPLQ9BXD5 320 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 EPHX3Q9H6B9 360 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 TTC12Q9H892 705 aaPredicted RBP5.85□□□□□ -1.47
LINC00458-206ENST00000607494 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 MAFFQ9ULX9 164 aa5.85□□□□□ -1.47
LINC00458-206ENST00000607494 FAM170AA1A519 330 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 TSPY2A6NKD2 308 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 C16orf96A6NNT2 1141 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 H7C0S8 307 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 ERAL1O75616 437 aaKnown RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 KAT7O95251 611 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 MBPP02686 304 aaPredicted RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 ALPLP05186 524 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 TSPY3P0CV98 308 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 TSPY8P0CW00 308 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 CYP4B1P13584 511 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 NNMTP40261 264 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 MTNR1AP48039 350 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 HTR6P50406 440 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 NANOS2P60321 138 aaKnown RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 GPC5P78333 572 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 EFNB1P98172 346 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 TSPY1Q01534 308 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 CFHR1Q03591 330 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 RASA2Q15283 850 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 MED22Q15528 200 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 RPUSD3Q6P087 351 aaKnown RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 NCEH1Q6PIU2 408 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 SLC39A5Q6ZMH5 540 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 MEPCEQ7L2J0 689 aaKnown RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 RRM2BQ7LG56 351 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 ANKRD13BQ86YJ7 626 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.47
LINC00458-206ENST00000607494 KLHL29Q96CT2 875 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 HDHD5Q9BXW7 423 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 TRIM31Q9BZY9 425 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 POT1Q9NUX5 634 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 EHD2Q9NZN4 543 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 SLCO3A1Q9UIG8 710 aa5.84□□□□□ -1.47
LINC00458-206ENST00000607494 ZMYM2Q9UBW7 1377 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 TEX13CA0A0J9YWL9 993 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 CD8B2A6NJW9 211 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 H3BNX3 289 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 CCNT1O60563 726 aaKnown RBP5.83□□□□□ -1.48
LINC00458-206ENST00000607494 TLR2O60603 784 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 PRAMEF2O60811 474 aa5.83□□□□□ -1.48
LINC00458-206ENST00000607494 EIF2S1P05198 315 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms