RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 FTSJ1Q9UET6 329 aa18.42■□□□□ 0.54
CCDC12-208ENST00000603885 CNOT8Q9UFF9 292 aaKnown RBP18.42■□□□□ 0.54
CCDC12-208ENST00000603885 AP4E1Q9UPM8 1137 aa18.42■□□□□ 0.54
CCDC12-208ENST00000603885 ASPMQ8IZT6 3477 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 TMEM191CA6NGB0 347 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 GOLGA8CPA6NN73 597 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 EIF3CLB5ME19 914 aaKnown RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 KRIT1O00522 736 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 RNF8O76064 485 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 SKILP12757 684 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 HNRNPA2B1P22626 353 aaKnown RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 EPHA8P29322 1005 aaPredicted RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 AKT2P31751 481 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 RXRGP48443 463 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 KIAA1161Q6NSJ0 714 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 PARS2Q7L3T8 475 aaKnown RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 DNAAF5Q86Y56 855 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 UMODL1-AS1Q8N2C9 162 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 TMEM145Q8NBT3 493 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 FNIP1Q8TF40 1166 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 ZNF653Q96CK0 615 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 HMCESQ96FZ2 354 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 KLHDC7BQ96G42 594 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 GDAP1L1Q96MZ0 367 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 EIF3CQ99613 913 aaKnown RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 MYOCQ99972 504 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 OSBPL1AQ9BXW6 950 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 GPATCH2LQ9NWQ4 482 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 TOR4AQ9NXH8 423 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 ZFR2Q9UPR6 939 aaKnown RBP18.41■□□□□ 0.54
CCDC12-208ENST00000603885 CA5BQ9Y2D0 317 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 FADS3Q9Y5Q0 445 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 SCINQ9Y6U3 715 aa18.41■□□□□ 0.54
CCDC12-208ENST00000603885 A0A1W2PQJ5 194 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 RASA4BC9J798 803 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 RASA4O43374 803 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 AP1G1O43747 822 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 TMCC1O94876 653 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 POP4O95707 220 aaKnown RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 MYBL1P10243 752 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 UBASH3AP57075 661 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 RPS21P63220 83 aaKnown RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 SERINC3Q13530 473 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 MYLK3Q32MK0 819 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 TMEM259Q4ZIN3 620 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 INO80DQ53TQ3 878 aaPredicted RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 TDRD12Q587J7 1177 aaKnown RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 ZNF805Q5CZA5 627 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 SEL1L3Q68CR1 1132 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 KDF1Q8NAX2 398 aaPredicted RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 RAB7BQ96AH8 199 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 FEM1CQ96JP0 617 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
CCDC12-208ENST00000603885 FZD3Q9NPG1 666 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 PCSK1NQ9UHG2 260 aa18.4■□□□□ 0.54
CCDC12-208ENST00000603885 C16orf96A6NNT2 1141 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 EEF2KO00418 725 aaKnown RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 PRPSAP2O60256 369 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 DKK1O94907 266 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 IGSF6O95976 241 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 UGT2B4P06133 528 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 THEGLP0DJG4 465 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 GKP32189 559 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 RHOAP61586 193 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 RAD51Q06609 339 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 ATXN7L2Q5T6C5 722 aaPredicted RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 ERMARDQ5T6L9 678 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 ZSCAN30Q86W11 494 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 IQCDQ96DY2 449 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 NCAPGQ9BPX3 1015 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 SNRNP25Q9BV90 132 aaKnown RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 TRIM7Q9C029 511 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 KLC2Q9H0B6 622 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 MRPL47Q9HD33 250 aaKnown RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 MYO1AQ9UBC5 1043 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 BZW2Q9Y6E2 419 aaKnown RBP18.39■□□□□ 0.53
CCDC12-208ENST00000603885 TRPM6Q9BX84 2022 aa18.39■□□□□ 0.53
CCDC12-208ENST00000603885 COL5A1P20908 1838 aaPredicted RBP18.38■□□□□ 0.53
CCDC12-208ENST00000603885 NEMP1O14524 444 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 TSPAN6O43657 245 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 PBX1P40424 430 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 NDST2P52849 883 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 BNIP3Q12983 259 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
CCDC12-208ENST00000603885 CA9Q16790 459 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 GDPD4Q6W3E5 623 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 VPS36Q86VN1 386 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 EID2Q8N6I1 236 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 ARFGAP1Q8N6T3 406 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 FAM174AQ8TBP5 190 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 ARHGEF26Q96DR7 871 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 KLHL32Q96NJ5 620 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 PEBP4Q96S96 227 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 ISCUQ9H1K1 167 aa18.38■□□□□ 0.53
CCDC12-208ENST00000603885 ENC1O14682 589 aa18.37■□□□□ 0.53
CCDC12-208ENST00000603885 DAPK3O43293 454 aa18.37■□□□□ 0.53
CCDC12-208ENST00000603885 KRT37O76014 449 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms