RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PRSS33Q8NF86 280 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RAB7BQ96AH8 199 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZC3H10Q96K80 434 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NUDCD1Q96RS6 583 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 IL12RB2Q99665 862 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HDAC8Q9BY41 377 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ATP13A3Q9H7F0 1226 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SGK2Q9HBY8 427 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZDHHC4Q9NPG8 344 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DYRK4Q9NR20 520 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 WASF2Q9Y6W5 498 aa9.62□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TSPAN11A1L157 253 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 BCLAF3A2AJT9 711 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ANTXRLA6NF34 631 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PROB1E7EW31 1015 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RPP40O75818 363 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NEBLO76041 1014 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 STK10O94804 968 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 IL1BP01584 269 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CR2P20023 1033 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC8A1P32418 973 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HOXD12P35452 270 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NUDT1P36639 197 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NBL1P41271 181 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TPMTP51580 245 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DYNLT1P63172 113 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 OTUD4Q01804 1114 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC10A7Q0GE19 358 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CYTH1Q15438 398 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ELF2Q15723 593 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MYLK3Q32MK0 819 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF569Q5MCW4 686 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DRICH1Q6PGQ1 229 aaPredicted RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KIAA1324Q6UXG2 1013 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ARHGAP36Q6ZRI8 547 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC13A5Q86YT5 568 aaPredicted RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 STK40Q8N2I9 435 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RASGEF1CQ8N431 466 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CADM4Q8NFZ8 388 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ACTL9Q8TC94 416 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LOXL4Q96JB6 756 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LGMNQ99538 433 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TM6SF2Q9BZW4 377 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TNKS2Q9H2K2 1166 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TRMT1Q9NXH9 659 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SNX12Q9UMY4 172 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ATP8A1Q9Y2Q0 1164 aa9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TNRC6BQ9UPQ9 1833 aaKnown RBP9.61□□□□□ -0.87
SQSTM1P1-201ENST00000603451 IGHV1OR15-9A0A0B4J2B8 117 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 USP27XA6NNY8 438 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KIF2AO00139 706 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KPNA3O00505 521 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 KRIT1O00522 736 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MID1O15344 667 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 AP1G1O43747 822 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 LEFTY1O75610 366 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SERPINF2P08697 491 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RBP3P10745 1247 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 VAV1P15498 845 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PECAM1P16284 738 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 CD6P30203 668 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 DRD3P35462 400 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 PSMD8P48556 350 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 FNTBP49356 437 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NEK3P51956 506 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RPL26P61254 145 aaKnown RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 POLR2LP62875 67 aaKnown RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ADCY2Q08462 1091 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ELP6Q0PNE2 266 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 AP1B1Q10567 949 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF211Q13398 564 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ZNF805Q5CZA5 627 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ITPRIPL1Q6GPH6 555 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TSSK4Q6SA08 328 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 GDPD4Q6W3E5 623 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RABEPKQ7Z6M1 372 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SRLQ86TD4 932 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 MMAAQ8IVH4 418 aaKnown RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 TP53INP2Q8IXH6 220 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC35F6Q8N357 371 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 SLC35B2Q8TB61 432 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 GRIN3AQ8TCU5 1115 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ACTRT1Q8TDG2 376 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HTR3CQ8WXA8 447 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NKD2Q969F2 451 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 ECHDC3Q96DC8 303 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 RTP4Q96DX8 246 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 NAPGQ99747 312 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 OMDQ99983 421 aa9.6□□□□□ -0.87
SQSTM1P1-201ENST00000603451 HEMGNQ9BXL5 484 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms