RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	WDR70	Q9NW82	654 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	SALL4	Q9UJQ4	1053 aa		18.85	■□□□□ 0.61
LTBP4-231	ENST00000602251	CCDC187	A0A096LP49	1063 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251		A6NNZ2	444 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	RIOK3	O14730	519 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	CASC3	O15234	703 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	NOBOX	O60393	691 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	CTSL	P07711	333 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	FAM87A	P0C7U9	286 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	NME1	P15531	152 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	SOX5	P35711	763 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	PERM1	Q5SV97	790 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	TAF3	Q5VWG9	929 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	SYPL2	Q5VXT5	272 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	APTX	Q7Z2E3	356 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	TMEM110	Q86TL2	294 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	TAC4	Q86UU9	113 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	C1orf131	Q8NDD1	294 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	BTN2A3P	Q96KV6	586 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	SEMA3C	Q99985	751 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	RTN4	Q9NQC3	1192 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	KLF15	Q9UIH9	416 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	SLC25A13	Q9UJS0	675 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	HS3ST3A1	Q9Y663	406 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	NBPF19	A0A087WUL8	3843 aa		18.84	■□□□□ 0.61
LTBP4-231	ENST00000602251	NBAS	A2RRP1	2371 aa		18.83	■□□□□ 0.61
LTBP4-231	ENST00000602251	SPTY2D1-AS1	A0A0U1RR47	76 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	POM121B	A6NF01	834 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251		F5H5T6	163 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	EPHB6	O15197	1021 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	BNIP3L	O60238	219 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	APOE	P02649	317 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	SFTPC	P11686	197 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	PDX1	P52945	283 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	INHBC	P55103	352 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	OXCT1	P55809	520 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	NFKBIB	Q15653	356 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	DEFB133	Q30KQ1	61 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	TMEM259	Q4ZIN3	620 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	SEL1L3	Q68CR1	1132 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	SH2D3C	Q8N5H7	860 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	MSANTD4	Q8NCY6	345 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	PRMT1	Q99873	361 aa	Known RBP	18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	FEM1A	Q9BSK4	669 aa		18.83	■□□□□ 0.6
LTBP4-231	ENST00000602251	KPNA3	O00505	521 aa	Predicted RBP	18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	TPP1	O14773	563 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	MUSK	O15146	869 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	TEX33	O43247	280 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	AQP9	O43315	295 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	PCDH8	O95206	1070 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC5A2	P31639	672 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	JAM2	P57087	298 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	CCDC15	Q0P6D6	951 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	SRSF6	Q13247	344 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	NR0B2	Q15466	257 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	TGIF1	Q15583	401 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	ZNF677	Q86XU0	584 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	WDTC1	Q8N5D0	677 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	OR52K2	Q8NGK3	314 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	PPP1R9B	Q96SB3	815 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	CPXM1	Q96SM3	734 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	POPDC2	Q9HBU9	364 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	PCDHGA7	Q9Y5G6	932 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	OR51B4	Q9Y5P0	310 aa		18.82	■□□□□ 0.6
LTBP4-231	ENST00000602251	TCAF2	A6NFQ2	919 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	KCNU1	A8MYU2	1149 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251		H3BM21	787 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	RNF103	O00237	685 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	CCDC172	P0C7W6	258 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	GP1BB	P13224	206 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	CHRNA3	P32297	505 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	YWHAZ	P63104	245 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	UBAP2L	Q14157	1087 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	EFHC1	Q5JVL4	640 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	BEND5	Q7L4P6	421 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	C14orf80	Q86SX3	495 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	NOP9	Q86U38	636 aa	Known RBP	18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	PARG	Q86W56	976 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	TMIE	Q8NEW7	156 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	WDR48	Q8TAF3	677 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	LMX1A	Q8TE12	382 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	EPS8L1	Q8TE68	723 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	IL12RB2	Q99665	862 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	BOC	Q9BWV1	1114 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	SLC17A9	Q9BYT1	436 aa		18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.81	■□□□□ 0.6
LTBP4-231	ENST00000602251		A0A1B0GTH6	734 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	PLD2	O14939	933 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	LSM8	O95777	96 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	PAK4	O96013	591 aa	Predicted RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	MME	P08473	750 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	JUND	P17535	347 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	TLE1	Q04724	770 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	FGL2	Q14314	439 aa		18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	KYAT3	Q6YP21	454 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	ERN2	Q76MJ5	926 aa	Known RBP	18.8	■□□□□ 0.6
LTBP4-231	ENST00000602251	ATP6V0D2	Q8N8Y2	350 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms