RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ZNF564Q8TBZ8 553 aaPredicted RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 CTNNBL1Q8WYA6 563 aaPredicted RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 SLC32A1Q9H598 525 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 ZDHHC6Q9H6R6 413 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 GAREM1Q9H706 876 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
HERC3-214ENST00000601319 CWC15Q9P013 229 aaKnown RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 FNDC3AQ9Y2H6 1198 aaKnown RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 MFHAS1Q9Y4C4 1052 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 SNX11Q9Y5W9 270 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 CABIN1Q9Y6J0 2220 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 A0A1W2PR77 199 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 MYO1FO00160 1098 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 DAPK3O43293 454 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 AP1G1O43747 822 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 DFNA5O60443 496 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 POP4O95707 220 aaKnown RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 IGSF6O95976 241 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 H2AFZP0C0S5 128 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 ADRB3P13945 408 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 TCF4P15884 667 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 CD38P28907 300 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 ARL4AP40617 200 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 ZNF423Q2M1K9 1284 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 SMTNL2Q2TAL5 461 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 LEKR1Q6ZMV7 388 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 H2AFVQ71UI9 128 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 PARS2Q7L3T8 475 aaKnown RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 ADAT2Q7Z6V5 191 aaKnown RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 IQCHQ86VS3 1027 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 ARHGAP12Q8IWW6 846 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 LZTR1Q8N653 840 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 NPWQ8N729 165 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 RAB7BQ96AH8 199 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 SERAC1Q96JX3 654 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 DEF6Q9H4E7 631 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 RCOR3Q9P2K3 495 aaPredicted RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 LHX3Q9UBR4 397 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 UBA2Q9UBT2 640 aaPredicted RBP17.46■□□□□ 0.39
HERC3-214ENST00000601319 CHD8Q9HCK8 2581 aa17.46■□□□□ 0.39
HERC3-214ENST00000601319 KRIT1O00522 736 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 AKR1B10O60218 316 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 RNGTTO60942 597 aaKnown RBP17.45■□□□□ 0.38
HERC3-214ENST00000601319 TMEM253P0C7T8 217 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 RARAP10276 462 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 C21orf59P57076 290 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 RHOAP61586 193 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 OVGP1Q12889 678 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 MYLK3Q32MK0 819 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 TMEM259Q4ZIN3 620 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 SLC45A4Q5BKX6 768 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 ZNF805Q5CZA5 627 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 KCNT1Q5JUK3 1230 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
HERC3-214ENST00000601319 LAYNQ6UX15 382 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 POLNQ7Z5Q5 900 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 HORMAD1Q86X24 394 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 NAXDQ8IW45 347 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 RYBPQ8N488 228 aaPredicted RBP17.45■□□□□ 0.38
HERC3-214ENST00000601319 MFSD2AQ8NA29 543 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 DEFB124Q8NES8 71 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 OR6K2Q8NGY2 324 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 TSC1Q92574 1164 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 BTBD6Q96KE9 485 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 SLC39A8Q9C0K1 460 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 IL21RQ9HBE5 538 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 AASDHPPTQ9NRN7 309 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 TM7SF3Q9NS93 570 aa17.45■□□□□ 0.38
HERC3-214ENST00000601319 PRAMEF26H0Y7S4 382 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 GIPC1O14908 333 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 PROSCO94903 275 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 WNT1P04628 370 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 MAN1A1P33908 653 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 PAPOLAP51003 745 aaKnown RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 ADKP55263 362 aaKnown RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 RAD51Q06609 339 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 ZNF284Q2VY69 593 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 ATXN7L2Q5T6C5 722 aaPredicted RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 TXNRD3NBQ6F5E7 133 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 KIAA1161Q6NSJ0 714 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 DBX2Q6ZNG2 339 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 TMEM145Q8NBT3 493 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 HSPH1Q92598 858 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 CELF6Q96J87 481 aaKnown RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 CSPG4P5Q96PW8 444 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 CHP1Q99653 195 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 PACSIN1Q9BY11 444 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 CPEB1Q9BZB8 566 aaKnown RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 NHEJ1Q9H9Q4 299 aaPredicted RBP17.44■□□□□ 0.38
HERC3-214ENST00000601319 PCDH18Q9HCL0 1135 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 CTTNBP2NLQ9P2B4 639 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 FADS3Q9Y5Q0 445 aa17.44■□□□□ 0.38
HERC3-214ENST00000601319 A0A1W2PQU0 124 aa17.43■□□□□ 0.38
HERC3-214ENST00000601319 AKR1B15C9JRZ8 316 aaPredicted RBP17.43■□□□□ 0.38
HERC3-214ENST00000601319 J3KR12 359 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms