RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 SLC17A9Q9BYT1 436 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 TM6SF2Q9BZW4 377 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 ZDHHC6Q9H6R6 413 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 AIPL1Q9NZN9 384 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 ACTL7AQ9Y615 435 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 CHD5Q8TDI0 1954 aa16.07■□□□□ 0.16
VRK3-221ENST00000600284 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 C16orf96A6NNT2 1141 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 FGF10O15520 208 aaPredicted RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 BUB1O43683 1085 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 GZMAP12544 262 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 PRLRP16471 622 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 ZNF165P49910 485 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 RAD51Q06609 339 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 ILKQ13418 452 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 MAMLD1Q13495 774 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 PARP15Q460N3 678 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 SEL1L3Q68CR1 1132 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 PLEKHA7Q6IQ23 1121 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 PARS2Q7L3T8 475 aaKnown RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 UMODL1-AS1Q8N2C9 162 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 RYBPQ8N488 228 aaPredicted RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 ARHGEF26Q96DR7 871 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 EDEM3Q9BZQ6 932 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 CCDC86Q9H6F5 360 aaKnown RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 DKK4Q9UBT3 224 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 CA5BQ9Y2D0 317 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 MFHAS1Q9Y4C4 1052 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 SPEGQ15772 3267 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 TP53BP1Q12888 1972 aaPredicted RBP16.06■□□□□ 0.16
VRK3-221ENST00000600284 PLXNB3Q9ULL4 1909 aa16.06■□□□□ 0.16
VRK3-221ENST00000600284 IGF2RP11717 2491 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 A0A1B0GTH6 734 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 A6NNZ2 444 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 TAF4O00268 1085 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 KRIT1O00522 736 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 CREB3O43889 395 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 RFPL3O75679 317 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 CKMT2P17540 419 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 PRKCIP41743 596 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 SERINC3Q13530 473 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 DHRS13Q6UX07 377 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 GCNT7Q6ZNI0 430 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 ZNF354CQ86Y25 554 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 OR13H1Q8NG92 308 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 GDAP1L1Q96MZ0 367 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 C1QTNF2Q9BXJ5 285 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 TTYH3Q9C0H2 523 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 ZFHX4Q86UP3 3567 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 PTPRBP23467 1997 aa16.05■□□□□ 0.16
VRK3-221ENST00000600284 RASA4BC9J798 803 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 RASA4O43374 803 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 TMCC1O94876 653 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 PAK4O96013 591 aaPredicted RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 ACADVLP49748 655 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 OGDHQ02218 1023 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 SGCGQ13326 291 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 ZNF211Q13398 564 aaPredicted RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 CAMK2BQ13554 666 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 ASIC2Q16515 512 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 KYAT3Q6YP21 454 aaKnown RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 Q6ZSR6 202 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 SLC25A45Q8N413 288 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
VRK3-221ENST00000600284 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 VOPP1Q96AW1 172 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 BMFQ96LC9 184 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 MYOCQ99972 504 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 NCAPGQ9BPX3 1015 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 HAUS4Q9H6D7 363 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 FZD3Q9NPG1 666 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 GPR27Q9NS67 375 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 DOCK9Q9BZ29 2069 aa16.04■□□□□ 0.16
VRK3-221ENST00000600284 WDFY3Q8IZQ1 3526 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 TMEM191CA6NGB0 347 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 TMCO5BA8MYB1 307 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 NEMP1O14524 444 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 IGSF6O95976 241 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 UGT2B4P06133 528 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 DGKAP23743 735 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 ACP1P24666 158 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 PSMA2P25787 234 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 GKP32189 559 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 HNF1BP35680 557 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 RABIFP47224 123 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 SUOXP51687 545 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 NDST2P52849 883 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 CLDN2P57739 230 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 TPI1P60174 286 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 RHOAP61586 193 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms