RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MAML1Q92585 1016 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 FATE1Q969F0 183 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF599Q96NL3 588 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 LGMNQ99538 433 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CEP44Q9C0F1 390 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 ARRDC1-AS1Q9H2J1 176 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 RXFP3Q9NSD7 469 aa19.17■□□□□ 0.66
CCDC9-205ENST00000600117 R3HDM2Q9Y2K5 976 aaKnown RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 FCF1Q9Y324 198 aaKnown RBP19.17■□□□□ 0.66
CCDC9-205ENST00000600117 CES2O00748 559 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 ATG13O75143 517 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 TMCC1O94876 653 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 EPN2O95208 641 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 KCNK5O95279 499 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 EPHX1P07099 455 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 VAV1P15498 845 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 PRLRP16471 622 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 NNMTP40261 264 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF33AQ06730 810 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 PRKD1Q15139 912 aaPredicted RBP19.16■□□□□ 0.66
CCDC9-205ENST00000600117 TMCO4Q5TGY1 634 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 KIAA1211LQ6NV74 962 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 TMEM92Q6UXU6 159 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 SYT10Q6XYQ8 523 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 B4GALNT4Q76KP1 1039 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 BZW1Q7L1Q6 419 aaKnown RBP19.16■□□□□ 0.66
CCDC9-205ENST00000600117 PTPRN2Q92932 1015 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 ISG20Q96AZ6 181 aaKnown RBP19.16■□□□□ 0.66
CCDC9-205ENST00000600117 ZNF419Q96HQ0 510 aaPredicted RBP19.16■□□□□ 0.66
CCDC9-205ENST00000600117 C16orf45Q96MC5 204 aaPredicted RBP19.16■□□□□ 0.66
CCDC9-205ENST00000600117 FAM118BQ9BPY3 351 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 BRD8Q9H0E9 1235 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 LHX3Q9UBR4 397 aa19.16■□□□□ 0.66
CCDC9-205ENST00000600117 SETXQ7Z333 2677 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 EDDM13A0A1B0GTR0 161 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 PPP1R12AO14974 1030 aaPredicted RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 MATN3O15232 486 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 SIN3BO75182 1162 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 FGGP02679 453 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 TCP1P17987 556 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 SLC10A7Q0GE19 358 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 XRCC4Q13426 336 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 CAMK2GQ13555 558 aaPredicted RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 RFTN1Q14699 578 aaPredicted RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 LBRQ14739 615 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 CRY1Q16526 586 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 C9orf64Q5T6V5 341 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 SDE2Q6IQ49 451 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 TIGD7Q6NT04 549 aaPredicted RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 UNQ6494/PRO21346Q6UXR6 183 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 Q6ZVU0 165 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 METTL3Q86U44 580 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 CCDC13Q8IYE1 715 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 PCDH20Q8N6Y1 951 aaKnown RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 TTC13Q8NBP0 860 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 CCNYQ8ND76 341 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 MS4A14Q96JA4 679 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 QKIQ96PU8 341 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 PRSS16Q9NQE7 514 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 SUN2Q9UH99 717 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 ZMIZ1Q9ULJ6 1067 aa19.15■□□□□ 0.66
CCDC9-205ENST00000600117 TTC7AQ9ULT0 858 aaPredicted RBP19.15■□□□□ 0.66
CCDC9-205ENST00000600117 GCN1Q92616 2671 aaKnown RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 TARSL2A2RTX5 802 aaKnown RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 ZNF185O15231 689 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 HOXB3P14651 431 aaPredicted RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 CASQ1P31415 396 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 EIF3EP60228 445 aaKnown RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 CCDC6Q16204 474 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 ACCSLQ4AC99 568 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 PLA2G2CQ5R387 149 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 ZC3H18Q86VM9 953 aaKnown RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 TEX26Q8N6G2 289 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 KDF1Q8NAX2 398 aaPredicted RBP19.14■□□□□ 0.65
CCDC9-205ENST00000600117 SLC35B2Q8TB61 432 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 GAB3Q8WWW8 586 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 TNKS2Q9H2K2 1166 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 SMARCAL1Q9NZC9 954 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 SLC8A2Q9UPR5 921 aa19.14■□□□□ 0.65
CCDC9-205ENST00000600117 HACD1B0YJ81 288 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 C1QTNF9BB2RNN3 333 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 KCNK1O00180 336 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 MUSKO15146 869 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 C1QTNF9P0C862 333 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 RBP3P10745 1247 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 IFI35P80217 286 aaPredicted RBP19.13■□□□□ 0.65
CCDC9-205ENST00000600117 AP1B1Q10567 949 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 HNRNPDQ14103 355 aaKnown RBP19.13■□□□□ 0.65
CCDC9-205ENST00000600117 SLC45A4Q5BKX6 768 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 PLPP6Q8IY26 295 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 TSEN2Q8NCE0 465 aaKnown RBP19.13■□□□□ 0.65
CCDC9-205ENST00000600117 OR2A12Q8NGT7 310 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 ACTRT1Q8TDG2 376 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 TFB1MQ8WVM0 346 aaKnown RBP19.13■□□□□ 0.65
CCDC9-205ENST00000600117 ATG4AQ8WYN0 398 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 VOPP1Q96AW1 172 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 ERLEC1Q96DZ1 483 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 SEPT3Q9UH03 358 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms