RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 HNRNPA1L2Q32P51 320 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 RBM44Q6ZP01 1051 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 VASH2Q86V25 355 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 IQCHQ86VS3 1027 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 XYLT1Q86Y38 959 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 C18orf8Q96DM3 657 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 SEMA3CQ99985 751 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 C11orf70Q9BRQ4 267 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 PACSIN1Q9BY11 444 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 EVA1BQ9NVM1 165 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 STRIP2Q9ULQ0 834 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 PYCARDQ9ULZ3 195 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 DOPEY1Q5JWR5 2465 aa14.24□□□□□ -0.13
SHKBP1-218ENST00000598907 RCCD1A6NED2 376 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 C10orf142B7Z368 130 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 PIAS2O75928 621 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 MYBL1P10243 752 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 GOT1P17174 413 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 SCNN1AP37088 669 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 PSEN1P49768 467 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 VAV2P52735 878 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 SNX16P57768 344 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 CLCA4Q14CN2 919 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 TCEAL1Q15170 157 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 C2CD6Q53TS8 623 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF542PQ5EBM4 170 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 PM20D1Q6GTS8 502 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 PLEKHA7Q6IQ23 1121 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 GUSBP11Q6P575 273 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF662Q6ZS27 426 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 BHLHA9Q7RTU4 235 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 EFL1Q7Z2Z2 1120 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 ZDHHC17Q8IUH5 632 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 FAM217AQ8IXS0 508 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 MSANTD4Q8NCY6 345 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 WDR36Q8NI36 951 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 TRIM11Q96F44 468 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 KLHDC7BQ96G42 594 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 MYO19Q96H55 970 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 CDK5RAP1Q96SZ6 601 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 CALN1Q9BXU9 219 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 MIS12Q9H081 205 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 LRRC4Q9HBW1 653 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 CNGB3Q9NQW8 809 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 ST7Q9NRC1 585 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 KCND1Q9NSA2 647 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 NLGN3Q9NZ94 848 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 CLIC5Q9NZA1 410 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 NBASA2RRP1 2371 aa14.23□□□□□ -0.13
SHKBP1-218ENST00000598907 TDRD6O60522 2096 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ZFC3H1O60293 1989 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 SPTBN1Q01082 2364 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 FAM170AA1A519 330 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 BTNL10A8MVZ5 291 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 TTC34A8MYJ7 566 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 IL1BP01584 269 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 CYP1A2P05177 515 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 CCDC175P0C221 793 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 RRM1P23921 792 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 SLC5A2P31639 672 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 TKTL1P51854 596 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 METAP1P53582 386 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ADIGQ0VDE8 80 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 OVGP1Q12889 678 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF177Q13360 481 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 C9orf64Q5T6V5 341 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 OLFML1Q6UWY5 402 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 PLD4Q96BZ4 506 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 ARHGEF26Q96DR7 871 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 TMA16Q96EY4 203 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 LACRTQ9GZZ8 138 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 LUC7LQ9NQ29 371 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 PLEKHB1Q9UF11 243 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 TFR2Q9UP52 801 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 PPP2R2CQ9Y2T4 447 aa14.22□□□□□ -0.13
SHKBP1-218ENST00000598907 CCDC187A0A096LP49 1063 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 A0A0U1RQJ8 604 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 K7ESM1 405 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 PIK3R2O00459 728 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 LZTS3O60299 673 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 FBXO21O94952 628 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 ADH1BP00325 375 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 LCP1P13796 627 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 PRLRP16471 622 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 C5AR1P21730 350 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 CSKP41240 450 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 DAOAP59103 153 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms