RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RNF135Q8IUD6 432 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 PALM2Q8IXS6 379 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 DNAAF3Q8N9W5 541 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 RIPOR3Q96MK2 946 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 EBNA1BP2Q99848 306 aaKnown RBP23.66■■□□□ 1.38
SYMPK-212ENST00000598896 FSD1LQ9BXM9 530 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 EBF3Q9H4W6 596 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 ZFP14Q9HCL3 533 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 VPS45Q9NRW7 570 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 ZC3H7BQ9UGR2 993 aaKnown RBP23.66■■□□□ 1.38
SYMPK-212ENST00000598896 GGA2Q9UJY4 613 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 FCF1Q9Y324 198 aaKnown RBP23.66■■□□□ 1.38
SYMPK-212ENST00000598896 MAD1L1Q9Y6D9 718 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 OTOL1A6NHN0 477 aaPredicted RBP23.66■■□□□ 1.38
SYMPK-212ENST00000598896 SDR42E2A6NKP2 422 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 CPP00450 1065 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 EIF3BP55884 814 aaKnown RBP23.66■■□□□ 1.38
SYMPK-212ENST00000598896 SLC12A1Q13621 1099 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 RANBP10Q6VN20 620 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 SMRP1Q8NCR6 262 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 LRCH3Q96II8 777 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 FAM83CQ9BQN1 747 aa23.66■■□□□ 1.38
SYMPK-212ENST00000598896 COL4A3Q01955 1670 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 ADH5P11766 374 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 CTSOP43234 321 aaPredicted RBP23.65■■□□□ 1.38
SYMPK-212ENST00000598896 CHRNA4P43681 627 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 LINC00523Q86TU6 105 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 EPS8L3Q8TE67 593 aaKnown RBP23.65■■□□□ 1.38
SYMPK-212ENST00000598896 CFAP36Q96G28 342 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 PLA2G2FQ9BZM2 168 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 NOD2Q9HC29 1040 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 LHX3Q9UBR4 397 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 MYLKQ15746 1914 aa23.65■■□□□ 1.38
SYMPK-212ENST00000598896 A0A087WUV0 522 aaPredicted RBP23.64■■□□□ 1.38
SYMPK-212ENST00000598896 SMAD6O43541 496 aaKnown RBP23.64■■□□□ 1.38
SYMPK-212ENST00000598896 PABPC1P11940 636 aaKnown RBP23.64■■□□□ 1.38
SYMPK-212ENST00000598896 LAMP2P13473 410 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 TPH1P17752 444 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 GBP2P32456 591 aaPredicted RBP23.64■■□□□ 1.38
SYMPK-212ENST00000598896 SERPINH1P50454 418 aaKnown RBP23.64■■□□□ 1.38
SYMPK-212ENST00000598896 CDH17Q12864 832 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 LONRF1Q17RB8 773 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 CERCAMQ5T4B2 595 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 RETSATQ6NUM9 610 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 C12orf40Q86WS4 652 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 ARL8AQ96BM9 186 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 STAMBPL1Q96FJ0 436 aa23.64■■□□□ 1.38
SYMPK-212ENST00000598896 HOXC11O43248 304 aaPredicted RBP23.64■■□□□ 1.37
SYMPK-212ENST00000598896 SCNN1BP51168 640 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 FCHO2Q0JRZ9 810 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 CASC4Q6P4E1 433 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 UNC5AQ6ZN44 842 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 FGF14Q92915 247 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 MED4Q9NPJ6 270 aa23.64■■□□□ 1.37
SYMPK-212ENST00000598896 PRUNE2Q8WUY3 3088 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 TCRBV9S1A1TA0A576 114 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 SMIM23A6NLE4 172 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 PIAS1O75925 651 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 ADH1CP00326 375 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 TSHRP16473 764 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 MTHFRP42898 656 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 SLCO1A2P46721 670 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 STK19P49842 368 aaPredicted RBP23.63■■□□□ 1.37
SYMPK-212ENST00000598896 GPS2Q13227 327 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 GAB4Q2WGN9 574 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 KRT71Q3SY84 523 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 TMEM215Q68D42 235 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 PARM1Q6UWI2 310 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 ADIPOR2Q86V24 386 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 ATP2A3Q93084 1043 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 RPL10LQ96L21 214 aaKnown RBP23.63■■□□□ 1.37
SYMPK-212ENST00000598896 KXD1Q9BQD3 176 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 TMEM109Q9BVC6 243 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 HPS4Q9NQG7 708 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 HAUS2Q9NVX0 235 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 RABGEF1Q9UJ41 708 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 FBXO10Q9UK96 956 aa23.63■■□□□ 1.37
SYMPK-212ENST00000598896 OPA1O60313 960 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 NFATC1O95644 943 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 GRM2Q14416 872 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 TTMPQ5BVD1 217 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 KIAA0907Q7Z7F0 614 aaPredicted RBP23.62■■□□□ 1.37
SYMPK-212ENST00000598896 ZNF557Q8N988 423 aaPredicted RBP23.62■■□□□ 1.37
SYMPK-212ENST00000598896 FBF1Q8TES7 1133 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 XPO6Q96QU8 1125 aaKnown RBP23.62■■□□□ 1.37
SYMPK-212ENST00000598896 BFARQ9NZS9 450 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 INSIG1O15503 277 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 ATP9BO43861 1147 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 SERPINF2P08697 491 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 PHBP35232 272 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 EFTUD2Q15029 972 aaKnown RBP eCLIP23.62■■□□□ 1.374e-6■■■□□ 19.1
SYMPK-212ENST00000598896 GEN1Q17RS7 908 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 HSP90B2PQ58FF3 399 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 MFSD6LQ8IWD5 586 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.62■■□□□ 1.37
SYMPK-212ENST00000598896 MYLIPQ8WY64 445 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 NUDCD1Q96RS6 583 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 SLC2A11Q9BYW1 496 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 TMBIM4Q9HC24 238 aa23.62■■□□□ 1.37
SYMPK-212ENST00000598896 ZNF821O75541 412 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms