RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ADRB3P13945 408 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 SERINC3Q13530 473 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 CA9Q16790 459 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 PARP15Q460N3 678 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 INO80DQ53TQ3 878 aaPredicted RBP15.32■□□□□ 0.04
LIG1-215ENST00000597901 ZNF805Q5CZA5 627 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 SEL1L3Q68CR1 1132 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 KDF1Q8NAX2 398 aaPredicted RBP15.32■□□□□ 0.04
LIG1-215ENST00000597901 TMEM145Q8NBT3 493 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 NETO2Q8NC67 525 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 CPLX3Q8WVH0 158 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 CASKIN2Q8WXE0 1202 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 SLC17A9Q9BYT1 436 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 TRIM7Q9C029 511 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 DHX35Q9H5Z1 703 aaKnown RBP15.32■□□□□ 0.04
LIG1-215ENST00000597901 ZMIZ1Q9ULJ6 1067 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 FADS3Q9Y5Q0 445 aa15.32■□□□□ 0.04
LIG1-215ENST00000597901 KNL1Q8NG31 2342 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 A0A1W2PQJ5 194 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 YKT6O15498 198 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 FGF10O15520 208 aaPredicted RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 AP1G1O43747 822 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 RNF8O76064 485 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 PAK4O96013 591 aaPredicted RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 MIPP30301 263 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 AKT2P31751 481 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 HTR7P34969 479 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 TPI1P60174 286 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 RPS21P63220 83 aaKnown RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 CYTH1Q15438 398 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 INAVAQ3KP66 663 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 ATXN7L2Q5T6C5 722 aaPredicted RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 HGSNATQ68CP4 663 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 PARS2Q7L3T8 475 aaKnown RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 OXR1Q8N573 874 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 EID2Q8N6I1 236 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 FNIP1Q8TF40 1166 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 MYOCQ99972 504 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 DONSONQ9NYP3 566 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 MYO1AQ9UBC5 1043 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 HS3ST3A1Q9Y663 406 aa15.31■□□□□ 0.04
LIG1-215ENST00000597901 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
LIG1-215ENST00000597901 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 EEF2KO00418 725 aaKnown RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 PRPSAP2O60256 369 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 TMCC1O94876 653 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 LDOC1O95751 146 aaPredicted RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 MYBL1P10243 752 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 PTMSP20962 102 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 HNRNPA2B1P22626 353 aaKnown RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 EPHA8P29322 1005 aaPredicted RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 NDST2P52849 883 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 CLDN2P57739 230 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 RAD51Q06609 339 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 FGL2Q14314 439 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 KIAA1161Q6NSJ0 714 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 GDPD4Q6W3E5 623 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 CCNI2Q6ZMN8 369 aaPredicted RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 TTC7BQ86TV6 843 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 RAB7BQ96AH8 199 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 ZNF653Q96CK0 615 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 TRIM11Q96F44 468 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 BMFQ96LC9 184 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 KLHL32Q96NJ5 620 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 PEBP4Q96S96 227 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 KCTD15Q96SI1 283 aaPredicted RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIG1-215ENST00000597901 OSBPL1AQ9BXW6 950 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 MRPL47Q9HD33 250 aaKnown RBP15.3■□□□□ 0.04
LIG1-215ENST00000597901 FZD3Q9NPG1 666 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 KLHL11Q9NVR0 708 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 FTSJ1Q9UET6 329 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 CAPN11Q9UMQ6 739 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 MFHAS1Q9Y4C4 1052 aa15.3■□□□□ 0.04
LIG1-215ENST00000597901 CACNA1BQ00975 2339 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 IGLON5A6NGN9 336 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 J3KR12 359 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 DAPK3O43293 454 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 TSPAN6O43657 245 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 SERPING1P05155 500 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 UGT2B4P06133 528 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 ABL2P42684 1182 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 HCAR3P49019 387 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 RHOAP61586 193 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 ZBED6P86452 979 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 SGCGQ13326 291 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 CYP4V2Q6ZWL3 525 aaPredicted RBP15.29■□□□□ 0.04
LIG1-215ENST00000597901 TMPRSS7Q7RTY8 843 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 KANSL1Q7Z3B3 1105 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 PSTKQ8IV42 348 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms