RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CRTC1Q6UUV9 634 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 OLFML1Q6UWY5 402 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 DCP2Q8IU60 420 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 PASD1Q8IV76 773 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 DUSP23Q9BVJ7 150 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 DYRK4Q9NR20 520 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 PIGVQ9NUD9 493 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 IL36AQ9UHA7 158 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 FADS3Q9Y5Q0 445 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 WASF2Q9Y6W5 498 aa16.79■□□□□ 0.28
SHKBP1-215ENST00000597649 UBR5O95071 2799 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 COL27A1Q8IZC6 1860 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 DRGXA6NNA5 263 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 ERBB2P04626 1255 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 TPM3P06753 285 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 RHOCP08134 193 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 NME1P15531 152 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 CCDC15Q0P6D6 951 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 DRAP1Q14919 205 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 PERM1Q5SV97 790 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 ZCCHC8Q6NZY4 707 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 KYAT3Q6YP21 454 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 EFL1Q7Z2Z2 1120 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 OR7D4Q8NG98 312 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 KLF6Q99612 283 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 C2orf49Q9BVC5 232 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 TMPRSS4Q9NRS4 437 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 ARHGEF38Q9NXL2 777 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 FLNCQ14315 2725 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 PTPN13Q12923 2485 aa16.78■□□□□ 0.28
SHKBP1-215ENST00000597649 EME2A4GXA9 379 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CDRT15L2A8MXV6 281 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 M0QYT0 321 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 EFSO43281 561 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 ZMPSTE24O75844 475 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 SLC9A1P19634 815 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 RBMS1P29558 406 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CXCR3P49682 368 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 RPS21P63220 83 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 EIF2B5Q13144 721 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 DEFB133Q30KQ1 61 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 C22orf39Q6P5X5 142 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 APTXQ7Z2E3 356 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 DCAF4L2Q8NA75 395 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 FAM174AQ8TBP5 190 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 MED8Q96G25 268 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 FEM1CQ96JP0 617 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CCDC114Q96M63 670 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 TKTL2Q9H0I9 626 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 TCEAL2Q9H3H9 227 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CLMPQ9H6B4 373 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 MPP6Q9NZW5 540 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 PNMA8BQ9ULN7 279 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 CSNK1G3Q9Y6M4 447 aa16.77■□□□□ 0.28
SHKBP1-215ENST00000597649 A0A1B0GTH6 734 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 IGLON5A6NGN9 336 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 AQP9O43315 295 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 DAB1O75553 588 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 GCATO75600 419 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 ADRB3P13945 408 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 PON1P27169 355 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 NOS2P35228 1153 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 USP8P40818 1118 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 CLCN6P51797 869 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 CLN3Q13286 438 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 ARHGAP44Q17R89 818 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 TFAP2DQ7Z6R9 452 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 SETD3Q86TU7 594 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 PARGQ86W56 976 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 LMX1AQ8TE12 382 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 VOPP1Q96AW1 172 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 NAP1L5Q96NT1 182 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 NPY6RQ99463 290 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 C1QTNF2Q9BXJ5 285 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 ZNF212Q9UDV6 495 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 SALL4Q9UJQ4 1053 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 PCDHGA8Q9Y5G5 932 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 ACTL7AQ9Y615 435 aa16.76■□□□□ 0.27
SHKBP1-215ENST00000597649 MUSKO15146 869 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 JUNDP17535 347 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 ITGB7P26010 798 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 L1CAMP32004 1257 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 RABIFP47224 123 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 NEK3P51956 506 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 PDX1P52945 283 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 SLC6A3Q01959 620 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 KCNC4Q03721 635 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 MTA1Q13330 715 aa16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 PDE1CQ14123 709 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-215ENST00000597649 SYCP1Q15431 976 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms