RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FNDC3AQ9Y2H6 1198 aaKnown RBP13.27□□□□□ -0.29
USE1-207ENST00000596136 CHD8Q9HCK8 2581 aa13.27□□□□□ -0.29
USE1-207ENST00000596136 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 SH3BP5O60239 455 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 PRAMEF11O60813 436 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
USE1-207ENST00000596136 ADRB3P13945 408 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 TCF4P15884 667 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 DNA2P51530 1060 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 NEK3P51956 506 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 SLC25A11Q02978 314 aaKnown RBP13.26□□□□□ -0.29
USE1-207ENST00000596136 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
USE1-207ENST00000596136 OVGP1Q12889 678 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 CYTH1Q15438 398 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 SETMARQ53H47 684 aaPredicted RBP13.26□□□□□ -0.29
USE1-207ENST00000596136 ZNF805Q5CZA5 627 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 LAYNQ6UX15 382 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 LEKR1Q6ZMV7 388 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 HORMAD1Q86X24 394 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 LZTR1Q8N653 840 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 RNF214Q8ND24 703 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 OSBPL1AQ9BXW6 950 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 TM6SF2Q9BZW4 377 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 SLC39A8Q9C0K1 460 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 ANAPC7Q9UJX3 599 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
USE1-207ENST00000596136 FADS3Q9Y5Q0 445 aa13.26□□□□□ -0.29
USE1-207ENST00000596136 A0A1W2PQU0 124 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ARHGAP42A6NI28 874 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 PRAMEF26H0Y7S4 382 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 H0Y8X5 98 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 MYO1FO00160 1098 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 TLR4O00206 839 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 MFAP3LO75121 409 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 RARAP10276 462 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 GKP32189 559 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 C21orf59P57076 290 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 PARS2Q7L3T8 475 aaKnown RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ADAT2Q7Z6V5 191 aaKnown RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 GLRX5Q86SX6 157 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 NAXDQ8IW45 347 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 TMEM145Q8NBT3 493 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 BAHD1Q8TBE0 780 aaPredicted RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 TSC1Q92574 1164 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 RAB7BQ96AH8 199 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 BTBD6Q96KE9 485 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 GDAP1L1Q96MZ0 367 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 CPEB1Q9BZB8 566 aaKnown RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 ZDHHC6Q9H6R6 413 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ERVMER34-1Q9H9K5 563 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 AASDHPPTQ9NRN7 309 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ABHD10Q9NUJ1 306 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 LHX3Q9UBR4 397 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 PCOLCE2Q9UKZ9 415 aa13.25□□□□□ -0.29
USE1-207ENST00000596136 ARID1BQ8NFD5 2236 aaPredicted RBP13.25□□□□□ -0.29
USE1-207ENST00000596136 A0A1B0GTQ1 180 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 J3KR12 359 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 KCNK3O14649 394 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 FLRT2O43155 660 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 DAPK3O43293 454 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 IGSF6O95976 241 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 H2AFZP0C0S5 128 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 KCNA4P22459 653 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 RXRGP48443 463 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 CSNK1DP48730 415 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 NXPH1P58417 271 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 RHOAP61586 193 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 FAM193AP78312 1265 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 RAD51Q06609 339 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 SLC45A4Q5BKX6 768 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 ATXN7L2Q5T6C5 722 aaPredicted RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 FBXL19Q6PCT2 694 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 H2AFVQ71UI9 128 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 ZNF354CQ86Y25 554 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 NPWQ8N729 165 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 OR6K2Q8NGY2 324 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 HCAR2Q8TDS4 363 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 ASB12Q8WXK4 309 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 FEM1CQ96JP0 617 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 ELF4Q99607 663 aaPredicted RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 CHP1Q99653 195 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms