RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ACTL7AQ9Y615 435 aa10.16□□□□□ -0.78
LIG1-209ENST00000596104 DOCK9Q9BZ29 2069 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 IGLON5A6NGN9 336 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 FPGTO14772 594 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 TCEA3O75764 348 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 F9P00740 461 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 JUNDP17535 347 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PON1P27169 355 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 CLCN1P35523 988 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 SCNN1AP37088 669 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 MLLT3P42568 568 aaPredicted RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 SULT1E1P49888 294 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PDX1P52945 283 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PTK2Q05397 1052 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 DEUP1Q05D60 604 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 CLN3Q13286 438 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PDE1CQ14123 709 aaPredicted RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 DRAP1Q14919 205 aaPredicted RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 NR0B2Q15466 257 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 SLC25A52Q3SY17 297 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 CARD16Q5EG05 197 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 KIAA1614Q5VZ46 1190 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 TRNP1Q6NT89 227 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 RETSATQ6NUM9 610 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 CRTC1Q6UUV9 634 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 LRRC31Q6UY01 552 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 RBM44Q6ZP01 1051 aaKnown RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 BNIPLQ7Z465 357 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 CLEC14AQ86T13 490 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 ZDHHC17Q8IUH5 632 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 SLC35F3Q8IY50 421 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 RBFAQ8N0V3 343 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 DENND6BQ8NEG7 585 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 TPCN2Q8NHX9 752 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 LMX1AQ8TE12 382 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 MED8Q96G25 268 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 SPON2Q9BUD6 331 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 TCEAL2Q9H3H9 227 aaPredicted RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 SIX2Q9NPC8 291 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PLCB1Q9NQ66 1216 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 GGT7Q9UJ14 662 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 PNMA8BQ9ULN7 279 aaPredicted RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 STAP1Q9ULZ2 295 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 ITM2BQ9Y287 266 aa10.15□□□□□ -0.78
LIG1-209ENST00000596104 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
LIG1-209ENST00000596104 GTPBP10A4D1E9 387 aaKnown RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 LMO7DNF2Z398 122 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 PYCARD-AS1I3L0S3 204 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 FOXN3O00409 490 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 MUSKO15146 869 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 TSPAN6O43657 245 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 GCATO75600 419 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 PNMA6AP0CW24 399 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 GKP32189 559 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 CDH5P33151 784 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 KRT9P35527 623 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 FLT3P36888 993 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 GABRB2P47870 512 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 DNA2P51530 1060 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 SNX16P57768 344 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 RNASE9P60153 205 aaKnown RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 GNA12Q03113 381 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 SGCGQ13326 291 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 ACBD5Q5T8D3 534 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 GBP6Q6ZN66 633 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 IRF2BP1Q8IU81 584 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 PLPP6Q8IY26 295 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 NAT6Q93015 286 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 RAB7BQ96AH8 199 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 ISG20Q96AZ6 181 aaKnown RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 CENPTQ96BT3 561 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 TBATAQ96M53 351 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 HAPLN3Q96S86 360 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 IL12RB2Q99665 862 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 LRRC61Q9BV99 259 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 TM6SF2Q9BZW4 377 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 SYNCQ9H7C4 482 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 ATP13A1Q9HD20 1204 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 TMEM51Q9NW97 253 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 SPASTQ9UBP0 616 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 APOBEC3BQ9UH17 382 aaKnown RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 IPO11Q9UI26 975 aaKnown RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 PAXBP1Q9Y5B6 917 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 COL27A1Q8IZC6 1860 aaPredicted RBP10.14□□□□□ -0.79
LIG1-209ENST00000596104 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
LIG1-209ENST00000596104 CCDC187A0A096LP49 1063 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 CXorf51AA0A1B0GTR3 108 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 C16orf96A6NNT2 1141 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 NTN3O00634 580 aaPredicted RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 AREL1O15033 823 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 EFSO43281 561 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 TNFSF15O95150 251 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 FGFR1OPO95684 399 aaKnown RBP10.13□□□□□ -0.79
LIG1-209ENST00000596104 KRT10P13645 584 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 IGFALSP35858 605 aa10.13□□□□□ -0.79
LIG1-209ENST00000596104 ACVRL1P37023 503 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms