RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CCNHP51946 323 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 BNIP3Q12983 259 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 DNAJC3Q13217 504 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 TMEM259Q4ZIN3 620 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 CCDC157Q569K6 752 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 ARSIQ5FYB1 569 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 HGSNATQ68CP4 663 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 ZNF571Q7Z3V5 609 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 ZSCAN30Q86W11 494 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 PDCD7Q8N8D1 485 aaKnown RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 SLC30A5Q8TAD4 765 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 CENPIQ92674 756 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 NTAN1Q96AB6 310 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
HOMER3-208ENST00000595756 KLHDC7BQ96G42 594 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 TMEM248Q9NWD8 314 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 LHX6Q9UPM6 363 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 CA5BQ9Y2D0 317 aa18.24■□□□□ 0.51
HOMER3-208ENST00000595756 CACNA1GO43497 2377 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 FAM149AA5PLN7 773 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 SLC31A1O15431 190 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 MFAP3LO75121 409 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 SKILP12757 684 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 ADRB3P13945 408 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 PRLRP16471 622 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 HDAC4P56524 1084 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 TBX2Q13207 712 aaPredicted RBP18.23■□□□□ 0.51
HOMER3-208ENST00000595756 ILKQ13418 452 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 CARD16Q5EG05 197 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
HOMER3-208ENST00000595756 KIAA1161Q6NSJ0 714 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 PLPP6Q8IY26 295 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 C3orf20Q8ND61 904 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 FAM174AQ8TBP5 190 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 FAM172AQ8WUF8 416 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 TBC1D31Q96DN5 1066 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 HEPHQ9BQS7 1158 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 ABHD10Q9NUJ1 306 aa18.23■□□□□ 0.51
HOMER3-208ENST00000595756 ZFR2Q9UPR6 939 aaKnown RBP18.23■□□□□ 0.51
HOMER3-208ENST00000595756 FCF1Q9Y324 198 aaKnown RBP18.23■□□□□ 0.51
HOMER3-208ENST00000595756 AP1G1O43747 822 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 LRIG2O94898 1065 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 CD160O95971 181 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 KRT3P12035 628 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 CDC25BP30305 580 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 L1CAMP32004 1257 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 ACVRL1P37023 503 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 SEL1L3Q68CR1 1132 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 RWDD4Q6NW29 188 aaKnown RBP18.22■□□□□ 0.51
HOMER3-208ENST00000595756 GCNT7Q6ZNI0 430 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 ABI3BPQ7Z7G0 1075 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 MARCH9Q86YJ5 346 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 CCDC185Q8N715 623 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 ARHGEF2Q92974 986 aaKnown RBP18.22■□□□□ 0.51
HOMER3-208ENST00000595756 TRIM11Q96F44 468 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 MYOCQ99972 504 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.22■□□□□ 0.51
HOMER3-208ENST00000595756 SELENOOQ9BVL4 669 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 MAGEH1Q9H213 219 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 FZD3Q9NPG1 666 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 GPR27Q9NS67 375 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 NDFIP2Q9NV92 336 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 KLHL11Q9NVR0 708 aa18.22■□□□□ 0.51
HOMER3-208ENST00000595756 MYLKQ15746 1914 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 SSU72P8A0A1W2PR75 194 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 TRABD2BA6NFA1 517 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 FAM72CH0Y354 149 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 RAMP2O60895 175 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 SDC3O75056 442 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 PCDH8O95206 1070 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 GJB6O95452 261 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 GSRP00390 522 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 CKMT2P17540 419 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 GPD1P21695 349 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 RPS21P63220 83 aaKnown RBP18.21■□□□□ 0.51
HOMER3-208ENST00000595756 PROX2Q3B8N5 592 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 FAM72AQ5TYM5 149 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 FAM72DQ6L9T8 149 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 MON1BQ7L1V2 547 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 PARS2Q7L3T8 475 aaKnown RBP18.21■□□□□ 0.51
HOMER3-208ENST00000595756 PHLDB2Q86SQ0 1253 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 FAM72BQ86X60 149 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 OR13H1Q8NG92 308 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 KLK6Q92876 244 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 NXPE2Q96DL1 559 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 IFT43Q96FT9 208 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 LRIG1Q96JA1 1093 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 TM6SF2Q9BZW4 377 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 ZDHHC6Q9H6R6 413 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 SCUBE2Q9NQ36 999 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 DNAI1Q9UI46 699 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 RAXQ9Y2V3 346 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 FADS3Q9Y5Q0 445 aa18.21■□□□□ 0.51
HOMER3-208ENST00000595756 A6NNZ2 444 aa18.2■□□□□ 0.5
HOMER3-208ENST00000595756 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
HOMER3-208ENST00000595756 DDX3XO00571 662 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms