RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SERPINB8P50452 374 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 SERPINH1P50454 418 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 LIMK2P53671 638 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CSE1LP55060 971 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 CDHR3Q6ZTQ4 885 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 YTHDF3Q7Z739 585 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 ARL14EPQ8N8R7 260 aaPredicted RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 ARRDC2Q8TBH0 407 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 MRPS31Q92665 395 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 ATP2A3Q93084 1043 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 TADA1Q96BN2 335 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 ZNF778Q96MU6 729 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 GCNAQ96QF7 691 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CYP2S1Q96SQ9 504 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 RAD9AQ99638 391 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 SEMA3CQ99985 751 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 SPON2Q9BUD6 331 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 UBA2Q9UBT2 640 aaPredicted RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 SEPT3Q9UH03 358 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 PHTF1Q9UMS5 762 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CPQQ9Y646 472 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 HEATR9A2RTY3 570 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TYW5A2RUC4 315 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 TIMM44O43615 452 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TLL1O43897 1013 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 GLRA3O75311 464 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 NEFHP12036 1026 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 HDCP19113 662 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 EN2P19622 333 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 NUMBP49757 651 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CYP4F8P98187 520 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CGB2Q6NT52 195 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 LILRA6Q6PI73 481 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TMC8Q8IU68 726 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 KREMEN2Q8NCW0 462 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 RANBP9Q96S59 729 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CINPQ9BW66 212 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 LSM7Q9UK45 103 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 SLC4A7Q9Y6M7 1214 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 GOLGA8TH3BQL2 631 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 MUSKO15146 869 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 GLUD1P00367 558 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CKMP06732 381 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TYK2P29597 1187 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 CDC25CP30307 473 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 PDE1CQ14123 709 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 RFTN1Q14699 578 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 SIRPB2Q5JXA9 342 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 STXBP5Q5T5C0 1151 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 PLPP4Q5VZY2 271 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 RNF219Q5W0B1 726 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 ALG1LQ6GMV1 187 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 CXorf57Q6NSI4 855 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 ESRP1Q6NXG1 681 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 ZNF783Q6ZMS7 281 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 Q6ZNB5 142 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 GAREM2Q75VX8 874 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TRIM42Q8IWZ5 723 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 C7orf61Q8IZ16 206 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 DCLK2Q8N568 766 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 OTUD6BQ8N6M0 293 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ARMC2Q8NEN0 867 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ADAMTS19Q8TE59 1207 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 HERVK_113Q902F9 699 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ISL2Q96A47 359 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 MGME1Q9BQP7 344 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 PLCD4Q9BRC7 762 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ACE2Q9BYF1 805 aaPredicted RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 MUC3BQ9H195 1237 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
NPC1-214ENST00000593280 SLCO1B3Q9NPD5 702 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 SNX15Q9NRS6 342 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TREX1Q9NSU2 369 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 ARL2BPQ9Y2Y0 163 aa12.08□□□□□ -0.48
NPC1-214ENST00000593280 TRAV19A0A0A6YYK7 116 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 LOC285095A0A1B0GVY8 99 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 LCHNA4D1U4 455 aa12.07□□□□□ -0.48
NPC1-214ENST00000593280 H0Y626 953 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms