RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 GABRG2P18507 467 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 POLR2EP19388 210 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CD68P34810 354 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CETN2P41208 172 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 VPS41P49754 854 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SERPINH1P50454 418 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 YBEYP58557 167 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 ECT2LQ008S8 904 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 DSC2Q02487 901 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 IL10RBQ08334 325 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 NIPAL4Q0D2K0 466 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 OLIG2Q13516 323 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 PDK1Q15118 436 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 PLK5Q496M5 336 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 FNDC3BQ53EP0 1204 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SYCP2LQ5T4T6 812 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 C22orf39Q6P5X5 142 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 DARS2Q6PI48 645 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 ZNF783Q6ZMS7 281 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CDKL3Q8IVW4 592 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SH2D3CQ8N5H7 860 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 LZTR1Q8N653 840 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 NOA1Q8NC60 698 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 TSEN2Q8NCE0 465 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 KIF18AQ8NI77 898 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CCDC110Q8TBZ0 833 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 WFIKKN2Q8TEU8 576 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 UCMAQ8WVF2 138 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 TFB1MQ8WVM0 346 aaKnown RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 HTR3CQ8WXA8 447 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 MAML1Q92585 1016 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SMIM14Q96QK8 99 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 KRT12Q99456 494 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 GABRG3Q99928 467 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 TRIM51Q9BSJ1 452 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 C2orf49Q9BVC5 232 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 DUSP15Q9H1R2 295 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SMOC1Q9H4F8 434 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 USP29Q9HBJ7 922 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 NT5MQ9NPB1 228 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 CD93Q9NPY3 652 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 DONSONQ9NYP3 566 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 THAP10Q9P2Z0 257 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-220ENST00000593008 SDK1Q7Z5N4 2213 aa9.8□□□□□ -0.84
DDX39A-220ENST00000593008 KIF2AO00139 706 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 PLK4O00444 970 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 PPP1R12AO14974 1030 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ZBTB24O43167 697 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 MAP3K13O43283 966 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 SIN3BO75182 1162 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 IFNB1P01574 187 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 EPHX1P07099 455 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 RETP07949 1114 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 DLDP09622 509 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 NDUFV2P19404 249 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 NFKB1P19838 968 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 COILP38432 576 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 PTGIRP43119 386 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 NR2C2P49116 596 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 FOXK2Q01167 660 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 BYSLQ13895 437 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 LBRQ14739 615 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 DLG2Q15700 870 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ELF2Q15723 593 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 CYP1B1Q16678 543 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 POM121L1PQ3SYA9 428 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 DNTTIP2Q5QJE6 756 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 TMCO4Q5TGY1 634 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 KIAA1324Q6UXG2 1013 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 SERPINA13PQ6UXR4 307 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ZNF567Q8N184 647 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 DEFB119Q8N690 84 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 C12orf50Q8NA57 414 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ATP11CQ8NB49 1132 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 SPATA4Q8NEY3 305 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 FRS2Q8WU20 508 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 MAGOHBQ96A72 148 aaKnown RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 CCDC114Q96M63 670 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 AGAP3Q96P47 875 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 TSGA13Q96PP4 275 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 ARRDC1-AS1Q9H2J1 176 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 CD248Q9HCU0 757 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 RBM22Q9NW64 420 aaKnown RBP eCLIP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 MBD1Q9UIS9 605 aaPredicted RBP9.79□□□□□ -0.84
DDX39A-220ENST00000593008 SLC25A13Q9UJS0 675 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 HS3ST2Q9Y278 367 aa9.79□□□□□ -0.84
DDX39A-220ENST00000593008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 BCLAF3A2AJT9 711 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 ZSCAN5CA6NGD5 496 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MATN3O15232 486 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 TIMM44O43615 452 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 SYNCRIPO60506 623 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 RHOBTB1O94844 696 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 PIGNO95427 931 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 METTL18O95568 372 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CTSLP07711 333 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CCNB1P14635 433 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms