RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 RNF103O00237 685 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 KDELR3O43731 214 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 SDC3O75056 442 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 PIAS2O75928 621 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 DGKAP23743 735 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 HTR7P34969 479 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RFC1P35251 1148 aaPredicted RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 ACVRL1P37023 503 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RABIFP47224 123 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 DNA2P51530 1060 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 ZNF143P52747 638 aaPredicted RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 HNRNPKP61978 463 aaKnown RBP eCLIP13.5□□□□□ -0.25
APOC1-209ENST00000592885 E2F1Q01094 437 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 UBXN1Q04323 297 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RAB6CQ53S08 254 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 ZNF805Q5CZA5 627 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 FAM72AQ5TYM5 149 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 SEL1L3Q68CR1 1132 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 FAM72DQ6L9T8 149 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 WDR59Q6PJI9 974 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 SLFN11Q7Z7L1 901 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 FAM72BQ86X60 149 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 SLC22A18ASQ8N1D0 253 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 CCDC185Q8N715 623 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RTL3Q8N8U3 475 aaKnown RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 KLK6Q92876 244 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 MYOCQ99972 504 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 CALN1Q9BXU9 219 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 TM6SF2Q9BZW4 377 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RAB6CQ9H0N0 254 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 FZD3Q9NPG1 666 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 NDFIP2Q9NV92 336 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 NLGN3Q9NZ94 848 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 RALYQ9UKM9 306 aaKnown RBP13.5□□□□□ -0.25
APOC1-209ENST00000592885 CACNA1GO43497 2377 aa13.5□□□□□ -0.25
APOC1-209ENST00000592885 TCRBV5S1A1TA0A578 114 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 NEMP2A6NFY4 417 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 C16orf96A6NNT2 1141 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 H3BM21 787 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
APOC1-209ENST00000592885 SIGLEC6O43699 453 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 POP4O95707 220 aaKnown RBP13.49□□□□□ -0.25
APOC1-209ENST00000592885 MBD3O95983 291 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 FERP16591 822 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 YBEYP58557 167 aaPredicted RBP13.49□□□□□ -0.25
APOC1-209ENST00000592885 DAB2P98082 770 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 RAD51Q06609 339 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 RTP5Q14D33 572 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 PARP15Q460N3 678 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 INO80DQ53TQ3 878 aaPredicted RBP13.49□□□□□ -0.25
APOC1-209ENST00000592885 Q6ZSR6 202 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 PARGQ86W56 976 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 MARCH9Q86YJ5 346 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 SLC25A45Q8N413 288 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 GDAP1L1Q96MZ0 367 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 EPAS1Q99814 870 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 AGPAT1Q99943 283 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 DUSP23Q9BVJ7 150 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 C1QTNF2Q9BXJ5 285 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 CATSPERBQ9H7T0 1116 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 SEPT11Q9NVA2 429 aaKnown RBP13.49□□□□□ -0.25
APOC1-209ENST00000592885 DONSONQ9NYP3 566 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 MYLKQ15746 1914 aa13.49□□□□□ -0.25
APOC1-209ENST00000592885 SPTY2D1-AS1A0A0U1RR47 76 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 EIF3CLB5ME19 914 aaKnown RBP13.48□□□□□ -0.25
APOC1-209ENST00000592885 KRIT1O00522 736 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 TRIM38O00635 465 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 TOR1BO14657 336 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 FPGTO14772 594 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 CCP110O43303 1012 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 GJB6O95452 261 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 IGSF6O95976 241 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 GP1BAP07359 652 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 CKMT1AP12532 417 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 CDK11BP21127 795 aaKnown RBP13.48□□□□□ -0.25
APOC1-209ENST00000592885 EPHB2P29323 1055 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 ABL2P42684 1182 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 SUOXP51687 545 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 CLDN2P57739 230 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 SGCGQ13326 291 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 FGL2Q14314 439 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 COL28A1Q2UY09 1125 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
APOC1-209ENST00000592885 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 RYBPQ8N488 228 aaPredicted RBP13.48□□□□□ -0.25
APOC1-209ENST00000592885 DCBLD1Q8N8Z6 715 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 FAM181AQ8N9Y4 354 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 VCPIP1Q96JH7 1222 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 BMFQ96LC9 184 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 MCEEQ96PE7 176 aa13.48□□□□□ -0.25
APOC1-209ENST00000592885 EIF3CQ99613 913 aaKnown RBP13.48□□□□□ -0.25
APOC1-209ENST00000592885 CNPY3Q9BT09 278 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms