RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SIK3Q9Y2K2 1263 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 FCF1Q9Y324 198 aaKnown RBP19.19■□□□□ 0.66
CCDC43-205ENST00000592333 DOCK9Q9BZ29 2069 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 CELSR3Q9NYQ7 3312 aa19.19■□□□□ 0.66
CCDC43-205ENST00000592333 SIGLEC16A6NMB1 481 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 RNF103O00237 685 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 TOR1BO14657 336 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 FPGTO14772 594 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SCAMP1O15126 338 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 KDELR3O43731 214 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SDC3O75056 442 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 PAK4O96013 591 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-205ENST00000592333 PLEKP08567 350 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-205ENST00000592333 HDAC4P56524 1084 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 YBEYP58557 167 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-205ENST00000592333 DAB2P98082 770 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 RAD51Q06609 339 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 PTP4A2Q12974 167 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SGCGQ13326 291 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 CDO1Q16878 200 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 C15orf59Q2T9L4 293 aaPredicted RBP19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SEL1L3Q68CR1 1132 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SLC22A18ASQ8N1D0 253 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 KLK6Q92876 244 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 SELENOOQ9BVL4 669 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 DONSONQ9NYP3 566 aa19.18■□□□□ 0.66
CCDC43-205ENST00000592333 LIMA1Q9UHB6 759 aaKnown RBP19.18■□□□□ 0.66
CCDC43-205ENST00000592333 TRPM6Q9BX84 2022 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 H3BM21 787 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 CSF2P04141 144 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 CCDC172P0C7W6 258 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 NME1P15531 152 aaKnown RBP19.17■□□□□ 0.66
CCDC43-205ENST00000592333 ACVRL1P37023 503 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 EIF2S3P41091 472 aaKnown RBP19.17■□□□□ 0.66
CCDC43-205ENST00000592333 SUOXP51687 545 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 INSM1Q01101 510 aaPredicted RBP19.17■□□□□ 0.66
CCDC43-205ENST00000592333 SYCP1Q15431 976 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 CLEC16AQ2KHT3 1053 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 PPP1R2P3Q6NXS1 205 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 PARS2Q7L3T8 475 aaKnown RBP19.17■□□□□ 0.66
CCDC43-205ENST00000592333 SLFN11Q7Z7L1 901 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 PARGQ86W56 976 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 NEK11Q8NG66 645 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 JOSD2Q8TAC2 188 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 SNIP1Q8TAD8 396 aaKnown RBP19.17■□□□□ 0.66
CCDC43-205ENST00000592333 GPT2Q8TD30 523 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 FAM172AQ8WUF8 416 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 ZDHHC6Q9H6R6 413 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 FZD3Q9NPG1 666 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 NLRC4Q9NPP4 1024 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 NDFIP2Q9NV92 336 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 FANCLQ9NW38 375 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 NEU3Q9UQ49 428 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 MFHAS1Q9Y4C4 1052 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 AK5Q9Y6K8 562 aa19.17■□□□□ 0.66
CCDC43-205ENST00000592333 IGSF10Q6WRI0 2623 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 ANKRD62A6NC57 917 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 C16orf96A6NNT2 1141 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FAM72CH0Y354 149 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 TPP1O14773 563 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 RRP8O43159 456 aaKnown RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 LZTS3O60299 673 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 GIMD1P0DJR0 217 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 DESP17661 470 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 GPD1P21695 349 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 HTR7P34969 479 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 RFC1P35251 1148 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 ABCG1P45844 678 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 CLDN2P57739 230 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FGL2Q14314 439 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FZD2Q14332 565 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 MYLK3Q32MK0 819 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FAM72AQ5TYM5 149 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FAM72DQ6L9T8 149 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 WDR59Q6PJI9 974 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 LRRC69Q6ZNQ3 347 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 PTAR1Q7Z6K3 402 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 FAM72BQ86X60 149 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 RTL3Q8N8U3 475 aaKnown RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 HCAR2Q8TDS4 363 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 BTN2A2Q8WVV5 523 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 BAP1Q92560 729 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 GRAMD1AQ96CP6 724 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 TBATAQ96M53 351 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 ERGIC2Q96RQ1 377 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 KLF6Q99612 283 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-205ENST00000592333 MYOCQ99972 504 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 ANO10Q9NW15 660 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 UCKL1Q9NWZ5 548 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 DNAI1Q9UI46 699 aa19.16■□□□□ 0.66
CCDC43-205ENST00000592333 POM121BA6NF01 834 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 LGALS16A8MUM7 142 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 WASH4PA8MWX3 477 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 AREL1O15033 823 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 EPHB6O15197 1021 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 MT-CO3P00414 261 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 HOXB3P14651 431 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-205ENST00000592333 ACTN2P35609 894 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 KLK7P49862 253 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms