RNA–Protein interactions for RNA: ENST00000592155.5

PALM-208, Transcript of paralemmin, human

TSL 4 BASIC

Gene PALM, Length 2,272 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PALM-208	ENST00000592155	SOCS4	Q8WXH5	440 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	UBE2O	Q9C0C9	1292 aa	Known RBP	21.3	■■□□□ 1
PALM-208	ENST00000592155	SMOC2	Q9H3U7	446 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	VTI1B	Q9UEU0	232 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	TCAF1	Q9Y4C2	921 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	GOLGA8Q	A0A0J9YX86	632 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	GOLGA8O	A6NCC3	632 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	GOLGA8N	F8WBI6	632 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	SORBS2	O94875	1100 aa	Known RBP	21.3	■■□□□ 1
PALM-208	ENST00000592155	ADRA1A	P35348	466 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	MGAT3	Q09327	533 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	CDC16	Q13042	620 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	OVOS1	Q6IE37	1185 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	TIGD7	Q6NT04	549 aa	Predicted RBP	21.3	■■□□□ 1
PALM-208	ENST00000592155	CD300LG	Q6UXG3	332 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	HPS6	Q86YV9	775 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	THEM5	Q8N1Q8	247 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	MOCOS	Q96EN8	888 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	FCRL2	Q96LA5	508 aa	Predicted RBP	21.3	■■□□□ 1
PALM-208	ENST00000592155	TMEM209	Q96SK2	561 aa		21.3	■■□□□ 1
PALM-208	ENST00000592155	WDR55	Q9H6Y2	383 aa	Predicted RBP	21.3	■■□□□ 1
PALM-208	ENST00000592155	PATJ	Q8NI35	1801 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	FAM95C	A0A1B0GW59	222 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	RGSL1	A5PLK6	1076 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	SLC22A2	O15244	555 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	AHCYL1	O43865	530 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	PAM	P19021	973 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	PAX3	P23760	479 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	ARNT	P27540	789 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	SERPINB5	P36952	375 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	PGGT1B	P53609	377 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	MPP1	Q00013	466 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	TSPY1	Q01534	308 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	LSM12	Q3MHD2	195 aa	Known RBP	21.29	■■□□□ 1
PALM-208	ENST00000592155	ACAD11	Q709F0	780 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	HASPIN	Q8TF76	798 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	FSD1L	Q9BXM9	530 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	FTHL17	Q9BXU8	183 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	SFMBT1	Q9UHJ3	866 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	UPP2	O95045	317 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	FES	P07332	822 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	PIK3R1	P27986	724 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	SLC5A3	P53794	718 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	ZNF513	Q8N8E2	541 aa	Predicted RBP	21.29	■■□□□ 1
PALM-208	ENST00000592155	RSPH1	Q8WYR4	309 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	RBM22	Q9NW64	420 aa	Known RBP eCLIP	21.29	■■□□□ 1
PALM-208	ENST00000592155	XPR1	Q9UBH6	696 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	ZDHHC2	Q9UIJ5	367 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	PADI3	Q9ULW8	664 aa		21.29	■■□□□ 1
PALM-208	ENST00000592155	NLRC5	Q86WI3	1866 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	MYLK	Q15746	1914 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	NEMP1	O14524	444 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	RPLP2	P05387	115 aa	Known RBP	21.28	■■□□□ 1
PALM-208	ENST00000592155	HLA-DQB2	P05538	268 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	EPHA3	P29320	983 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	TUSC3	Q13454	348 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	TCHHL1	Q5QJ38	904 aa	Predicted RBP	21.28	■■□□□ 1
PALM-208	ENST00000592155	C17orf99	Q6UX52	265 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	LRRC49	Q8IUZ0	686 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	CEP97	Q8IW35	865 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	RP9	Q8TA86	221 aa	Known RBP	21.28	■■□□□ 1
PALM-208	ENST00000592155	PDCD6IP	Q8WUM4	868 aa	Known RBP	21.28	■■□□□ 1
PALM-208	ENST00000592155	CASP10	Q92851	521 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	GPR78	Q96P69	363 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	VCX3B	Q9H321	246 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	ACSS2	Q9NR19	701 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	TREX1	Q9NSU2	369 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	NDFIP2	Q9NV92	336 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	TTC3	P53804	2025 aa		21.28	■■□□□ 1
PALM-208	ENST00000592155	MSI1	O43347	362 aa	Known RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	GRID2	O43424	1007 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	DLX3	O60479	287 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	PMPCB	O75439	489 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	PGK1	P00558	417 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	ADSL	P30566	484 aa	Predicted RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	CD52	P31358	61 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	CCR10	P46092	362 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	CNGA3	Q16281	694 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	OR52E8	Q6IFG1	317 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	RNF111	Q6ZNA4	994 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	CPSF7	Q8N684	471 aa	Known RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	UPF1	Q92900	1129 aa	Known RBP eCLIP	21.27	■■□□□ 1	2e-9	■■■■■ 37
PALM-208	ENST00000592155	NUF2	Q9BZD4	464 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	NYNRIN	Q9P2P1	1898 aa	Known RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155		A0A0U1RQF3	1178 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	ENO4	A6NNW6	628 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	MGEA5	O60502	916 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	SLC1A2	P43004	574 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	ARTN	Q5T4W7	220 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	KIAA0930	Q6ICG6	404 aa	Predicted RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	RANBP10	Q6VN20	620 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	SETD3	Q86TU7	594 aa	Predicted RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	SPATA2L	Q8IUW3	424 aa	Predicted RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	MFSD6L	Q8IWD5	586 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	LSMEM2	Q8N112	164 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	C2CD4A	Q8NCU7	369 aa	Predicted RBP	21.27	■■□□□ 1
PALM-208	ENST00000592155	PPP2R3C	Q969Q6	453 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	NXNL1	Q96CM4	212 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	PPP1R36	Q96LQ0	422 aa		21.27	■■□□□ 1
PALM-208	ENST00000592155	CCDC28B	Q9BUN5	200 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms