RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ENDOD1O94919 500 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 CYP1A1P04798 512 aaPredicted RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 CALB1P05937 261 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 MMP8P22894 467 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 ADRA1BP35368 520 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 ACTN2P35609 894 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 PTPN9P43378 593 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 GSCP56915 257 aaPredicted RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 POLR2FP61218 127 aaKnown RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 ARF5P84085 180 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 FMO1Q01740 532 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 RAD51Q06609 339 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 RTP5Q14D33 572 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 SEL1L3Q68CR1 1132 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 GCNT7Q6ZNI0 430 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 PARS2Q7L3T8 475 aaKnown RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 PARGQ86W56 976 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 EMC1Q8N766 993 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 DENND6BQ8NEG7 585 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 NEK11Q8NG66 645 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 ENOX1Q8TC92 643 aaKnown RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 RXFP2Q8WXD0 754 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 CASKIN2Q8WXE0 1202 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 DEPDC7Q96QD5 511 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 C1QTNF7Q9BXJ2 289 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 OSBPL2Q9H1P3 480 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 MAGEH1Q9H213 219 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 VPS16Q9H269 839 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 TMPRSS4Q9NRS4 437 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 TMEM248Q9NWD8 314 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 DNAJC28Q9NX36 388 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 NCKIPSDQ9NZQ3 722 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 ZFR2Q9UPR6 939 aaKnown RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 CA5BQ9Y2D0 317 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 FCF1Q9Y324 198 aaKnown RBP10.32□□□□□ -0.76
VMP1-214ENST00000592106 FADS3Q9Y5Q0 445 aa10.32□□□□□ -0.76
VMP1-214ENST00000592106 CFAP47Q6ZTR5 3102 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 FAM170AA1A519 330 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 IGSF6O95976 241 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 GSRP00390 522 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 GP1BAP07359 652 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 KRT3P12035 628 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 GPD1P21695 349 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 CLDN2P57739 230 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 SEMG2Q02383 582 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 PTK2BQ14289 1009 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 KRT31Q15323 416 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 C15orf59Q2T9L4 293 aaPredicted RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 ZNF805Q5CZA5 627 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 EFHC2Q5JST6 749 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 MANEALQ5VSG8 457 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 TRNP1Q6NT89 227 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 DPY19L2P1Q6NXN4 242 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 Q6ZSR6 202 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 TMC6Q7Z403 805 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 OR2AP1Q8NGE2 309 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 SNIP1Q8TAD8 396 aaKnown RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 SLC20A1Q8WUM9 679 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 BTN2A2Q8WVV5 523 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 ARHGEF2Q92974 986 aaKnown RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 GLMNQ92990 594 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 NTAN1Q96AB6 310 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 GDAP1L1Q96MZ0 367 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 SLC17A9Q9BYT1 436 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 NLRC4Q9NPP4 1024 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 SEPT11Q9NVA2 429 aaKnown RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 DONSONQ9NYP3 566 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 ADAM22Q9P0K1 906 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 HECAQ9UBI9 543 aaPredicted RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 ZNF212Q9UDV6 495 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 NOCTQ9UK39 431 aaKnown RBP10.31□□□□□ -0.76
VMP1-214ENST00000592106 DOCK4Q8N1I0 1966 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 IGF2RP11717 2491 aa10.31□□□□□ -0.76
VMP1-214ENST00000592106 ANKRD11Q6UB99 2663 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 C2CD4BA6NLJ0 364 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 KRIT1O00522 736 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 TRIM38O00635 465 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 TOR1BO14657 336 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 SCAMP1O15126 338 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 LRIG2O94898 1065 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 POP4O95707 220 aaKnown RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 PAK4O96013 591 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 MT-CO3P00414 261 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CSF2P04141 144 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 PLEKP08567 350 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CKMT1AP12532 417 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 NME1P15531 152 aaKnown RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 XPAP23025 273 aaPredicted RBP10.3□□□□□ -0.76
VMP1-214ENST00000592106 ACVRL1P37023 503 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 AIF1P55008 147 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 CLDN6P56747 220 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 JAM2P57087 298 aa10.3□□□□□ -0.76
VMP1-214ENST00000592106 INSM1Q01101 510 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms