RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 GCNT1Q02742 428 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 MGAT3Q09327 533 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 TRPC3Q13507 836 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 PTPN14Q15678 1187 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 SGSM1Q2NKQ1 1148 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 DNTTIP2Q5QJE6 756 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 UBXN11Q5T124 520 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 TRAPPC11Q7Z392 1133 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 FAM228AQ86W67 206 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 PPP1R3BQ86XI6 285 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 ARHGEF19Q8IW93 802 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 OR5B17Q8NGF7 314 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 SLC35B2Q8TB61 432 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 JAKMIP2Q96AA8 810 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 ZCCHC4Q9H5U6 513 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 BRD9Q9H8M2 597 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 PLA2G3Q9NZ20 509 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 CFAP97Q9P2B7 532 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 PIN4Q9Y237 131 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 DERAQ9Y315 318 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 C2CD2Q9Y426 696 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 PTPRJQ12913 1337 aa8.2□□□□□ -1.1
NEDD4L-230ENST00000590638 TRIP11Q15643 1979 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 USP27XA6NNY8 438 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 FOXN3O00409 490 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 FRS3O43559 492 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 CHRNA1P02708 482 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 PLEKP08567 350 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 CCL5P13501 91 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 ATICP31939 592 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 HHEXQ03014 270 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 TMEM132DQ14C87 1099 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 ELAVL1Q15717 326 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 ASTE1Q2TB18 679 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 C10orf76Q5T2E6 689 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 ATXN7L2Q5T6C5 722 aaPredicted RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 TWF2Q6IBS0 349 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 JADE1Q6IE81 842 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 KIAA1328Q86T90 577 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 EFCAB13Q8IY85 973 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 HACE1Q8IYU2 909 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 KRT78Q8N1N4 520 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 D2HGDHQ8N465 521 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 IL17RDQ8NFM7 739 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 SHC3Q92529 594 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 TAF4BQ92750 862 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 APIPQ96GX9 242 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 DEFB118Q96PH6 123 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 TBCBQ99426 244 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 DESI2Q9BSY9 194 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 EIF2AQ9BY44 585 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 GPR88Q9GZN0 384 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 HAUS4Q9H6D7 363 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 SLC23A1Q9UHI7 598 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 DUSP10Q9Y6W6 482 aa8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 PDCD11Q14690 1871 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-230ENST00000590638 KRT86O43790 486 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 HAUS5O94927 633 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 ASS1P00966 412 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 AHSGP02765 367 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 INHBBP09529 407 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 TNNT1P13805 278 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 RPL17P18621 184 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 MSX2P35548 267 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 MAGEA1P43355 309 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 CDK7P50613 346 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 VAV2P52735 878 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 NOMO3P69849 1222 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 NOP14P78316 857 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 PKN2Q16513 984 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 SLC18A3Q16572 532 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 TRIM71Q2Q1W2 868 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 FBXO47Q5MNV8 452 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 ANKS6Q68DC2 871 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 FBXO46Q6PJ61 603 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 GLB1LQ6UWU2 654 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 FAM43BQ6ZT52 329 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 DOK3Q7L591 496 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 CTU1Q7Z7A3 348 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 SRLQ86TD4 932 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 FAM90A1Q86YD7 464 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 FAM71AQ8IYT1 594 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 CAGE1Q8TC20 777 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 ST8SIA2Q92186 375 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 SNX27Q96L92 541 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 C16orf45Q96MC5 204 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 PI4K2AQ9BTU6 479 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 IFIH1Q9BYX4 1025 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 TSGA10Q9BZW7 698 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 BTBD1Q9H0C5 482 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 RSAD1Q9HA92 442 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 ERVK-5Q9HDB9 667 aa8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 TRMT13Q9NUP7 481 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-230ENST00000590638 KLHL11Q9NVR0 708 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms