RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 EXD1Q8NHP7 514 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 LRRN4Q8WUT4 740 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 FSCN3Q9NQT6 498 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC25A13Q9UJS0 675 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 ASCC3Q8N3C0 2202 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 CKAP5Q14008 2032 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 hCG_1818297A0A087WSY0 165 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF487B1APH4 448 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 ETFBP38117 255 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 RWDD2BP57060 319 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 DYNLT1P63172 113 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 FAM193AP78312 1265 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 RPL6Q02878 288 aaKnown RBP21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 ODF2Q5BJF6 829 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 MEI1Q5TIA1 1274 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC9A4Q6AI14 798 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 SDE2Q6IQ49 451 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 NPNTQ6UXI9 565 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC36A4Q6YBV0 504 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 VSIG1Q86XK7 387 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 CCDC50Q8IVM0 306 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 SH2D3CQ8N5H7 860 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 FRS2Q8WU20 508 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 HEMGNQ9BXL5 484 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC6A17Q9H1V8 727 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 CAPN10Q9HC96 672 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 HS3ST2Q9Y278 367 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 PKD1L2Q7Z442 2459 aa21.87■■□□□ 1.09
R3HDM4-206ENST00000590454 ARHGAP42A6NI28 874 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 NPC1O15118 1278 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 ATP9BO43861 1147 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 ST8SIA6P61647 398 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 DLG2Q15700 870 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 HNRNPA1L2Q32P51 320 aaKnown RBP21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 MINDY1Q8N5J2 469 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 LZTR1Q8N653 840 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 ATP11CQ8NB49 1132 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 RBM41Q96IZ5 413 aaKnown RBP21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 PDFQ9HBH1 243 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 DONSONQ9NYP3 566 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 FCF1Q9Y324 198 aaKnown RBP21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 GPSM3Q9Y4H4 160 aa21.86■■□□□ 1.09
R3HDM4-206ENST00000590454 MIF4GDA9UHW6 222 aaKnown RBP21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 ARHGAP33O14559 1287 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 PRAMEF11O60813 436 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 SIN3BO75182 1162 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF821O75541 412 aaPredicted RBP21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 SERPINH1P50454 418 aaKnown RBP21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 ACCSLQ4AC99 568 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 TFDP3Q5H9I0 405 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 C9orf64Q5T6V5 341 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 KDM1BQ8NB78 822 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 PTPRN2Q92932 1015 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 ALS2CR12Q96Q35 445 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 MAK16Q9BXY0 300 aaKnown RBP21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 TNKS2Q9H2K2 1166 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 PRSS16Q9NQE7 514 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 DTLQ9NZJ0 730 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 SAE1Q9UBE0 346 aaPredicted RBP21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 HPCAL4Q9UM19 191 aa21.85■■□□□ 1.09
R3HDM4-206ENST00000590454 AKAP13Q12802 2813 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 PCNX2A6NKB5 2137 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 APOL1O14791 398 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 CST8O60676 142 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 SYPP08247 313 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 CD59P13987 128 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 VASPP50552 380 aaPredicted RBP21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF33AQ06730 810 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 RETSATQ6NUM9 610 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 C19orf48Q6RUI8 117 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 Q6ZVU0 165 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 DEFB119Q8N690 84 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 UBL4BQ8N7F7 174 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 TRIM58Q8NG06 486 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 TLR10Q9BXR5 811 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 DNAAF2Q9NVR5 837 aaKnown RBP21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 IPO11Q9UI26 975 aaKnown RBP21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 HEY1Q9Y5J3 304 aa21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 FASNP49327 2511 aaKnown RBP21.84■■□□□ 1.09
R3HDM4-206ENST00000590454 SYNCRIPO60506 623 aaKnown RBP21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 MAFKO60675 156 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 PEX11BO96011 259 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 PECAM1P16284 738 aaPredicted RBP21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 GABRG2P18507 467 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 SERPINB6P35237 376 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 COPAP53621 1224 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 GALNT2Q10471 571 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC14A1Q13336 389 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 CAMK2GQ13555 558 aaPredicted RBP21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 CYTH1Q15438 398 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 TRIP6Q15654 476 aaKnown RBP21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 PPP2R5EQ16537 467 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF569Q5MCW4 686 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 FAM182AQ5T1J6 154 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 C22orf39Q6P5X5 142 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 B4GALNT4Q76KP1 1039 aa21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 MKRN2Q9H000 416 aaKnown RBP21.83■■□□□ 1.09
R3HDM4-206ENST00000590454 PCDHB9Q9Y5E1 797 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms